Re: [PyMOL] Display technical info about objects
Most helpful, thats exactly the solution I was looking for. Thanks a lot Martin On 17.01.12 16:01, Jason Vertrees wrote: Hi Martin, PyMOL does not keep track of which files the objects were loaded from. If you wanted, you could wrap the load command in with your own load command that keeps track of such information, for example in a dictionary. That could look something like this: def load_with_props(fileName, objName): # store whatever info you want, like the filename obj_info[objName] = fileName # ... do more recording of properties you choose # ask PyMOL to now load the file cmd.load(fileName,objName) Then you could just query obj_info based on object name: for obj in cmd.get_names(): print obj_info[obj] Cheers, -- Jason On Tue, Jan 17, 2012 at 3:44 AM, Martin Hedigerma@bluewin.ch wrote: Dear List I'm frequently loading a number of objects into PyMOL which formally have the same name, but are different in structure. Sometimes it can become a bit difficult to keep track of which object is what. Is there a way to display technical information about a loaded object? Say, the file path to the loaded PDB file? That would be great. Thanks for hints. Martin -- Keep Your Developer Skills Current with LearnDevNow! The most comprehensive online learning library for Microsoft developers is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, Metro Style Apps, more. Free future releases when you subscribe now! http://p.sf.net/sfu/learndevnow-d2d ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Keep Your Developer Skills Current with LearnDevNow! The most comprehensive online learning library for Microsoft developers is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, Metro Style Apps, more. Free future releases when you subscribe now! http://p.sf.net/sfu/learndevnow-d2d ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
[PyMOL] Display technical info about objects
Dear List I'm frequently loading a number of objects into PyMOL which formally have the same name, but are different in structure. Sometimes it can become a bit difficult to keep track of which object is what. Is there a way to display technical information about a loaded object? Say, the file path to the loaded PDB file? That would be great. Thanks for hints. Martin -- Keep Your Developer Skills Current with LearnDevNow! The most comprehensive online learning library for Microsoft developers is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, Metro Style Apps, more. Free future releases when you subscribe now! http://p.sf.net/sfu/learndevnow-d2d ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] Display technical info about objects
Hi Martin, PyMOL does not keep track of which files the objects were loaded from. If you wanted, you could wrap the load command in with your own load command that keeps track of such information, for example in a dictionary. That could look something like this: def load_with_props(fileName, objName): # store whatever info you want, like the filename obj_info[objName] = fileName # ... do more recording of properties you choose # ask PyMOL to now load the file cmd.load(fileName,objName) Then you could just query obj_info based on object name: for obj in cmd.get_names(): print obj_info[obj] Cheers, -- Jason On Tue, Jan 17, 2012 at 3:44 AM, Martin Hediger ma@bluewin.ch wrote: Dear List I'm frequently loading a number of objects into PyMOL which formally have the same name, but are different in structure. Sometimes it can become a bit difficult to keep track of which object is what. Is there a way to display technical information about a loaded object? Say, the file path to the loaded PDB file? That would be great. Thanks for hints. Martin -- Keep Your Developer Skills Current with LearnDevNow! The most comprehensive online learning library for Microsoft developers is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, Metro Style Apps, more. Free future releases when you subscribe now! http://p.sf.net/sfu/learndevnow-d2d ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 -- Keep Your Developer Skills Current with LearnDevNow! The most comprehensive online learning library for Microsoft developers is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, Metro Style Apps, more. Free future releases when you subscribe now! http://p.sf.net/sfu/learndevnow-d2d ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
