Re: [PyMOL] CEalign - PyMOL Build
That's a +1 from me here. Good idea. Cheers, JJ On Tue, Feb 2, 2010 at 8:49 PM, Jason Vertrees jason.vertr...@schrodinger.com wrote: Hi all, So, after updating APBS (pushed to SourceForge) with Michael Lerner, I went ahead and built CEalign into PyMOL. I haven't pushed that code to SourceForge, because I'd like to test it more before releasing it. The way it's packaged in there now, you just compile PyMOL from source and you get cealign for free. Of course, this will make it into the incentive compiled versions, too. Once I'm happy with it, I'll send it up to SourceForge and let everyone know. Regards, -- Jason On Tue, Feb 2, 2010 at 3:29 PM, Thomas Juettemann juettem...@gmail.com wrote: +3 from me and people to busy writing grant applications. Built-in CE would be awesome! Thomas On Tue, Feb 2, 2010 at 12:19, Thomas Stout tst...@exelixis.com wrote: I thought that I had +1'd to this last week, but I don't see that note... If legal, I'm also +1-ing for 5 additional people here that do not subscribe to the mailing list... (or should that be +5-ing?) -Tom -Original Message- From: Sean Law [mailto:magic...@hotmail.com] Sent: Thursday, January 28, 2010 12:47 PM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] CEalign - PyMOL Build Jason, I would LOVE to see CEalign built along with PyMOL. +1 Sean Windows Live Messenger makes it easier to stay in touch - learn how! http://go.microsoft.com/?linkid=9706113 This email (including any attachments) may contain material that is confidential and privileged and is for the sole use of the intended recipient. Any review, reliance or distribution by others or forwarding without express permission is strictly prohibited. If you are not the intended recipient, please contact the sender and delete all copies. Exelixis, Inc. reserves the right, to the extent and under circumstances permitted by applicable law, to retain, monitor and intercept e-mail messages to and from its systems. -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Dr Jonathan James Phillips Research Fellow Centre for Chemical and Structural Biology Dept. of Chemistry and Biochemistry School of Life Sciences University of Sussex Brighton, BN1 9QG Tel: 01273 877386 E-mail: j.j.phill...@sussex.ac.uk -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https
Re: [PyMOL] CEalign - PyMOL Build
+3 from me and people to busy writing grant applications. Built-in CE would be awesome! Thomas On Tue, Feb 2, 2010 at 12:19, Thomas Stout tst...@exelixis.com wrote: I thought that I had +1'd to this last week, but I don't see that note... If legal, I'm also +1-ing for 5 additional people here that do not subscribe to the mailing list... (or should that be +5-ing?) -Tom -Original Message- From: Sean Law [mailto:magic...@hotmail.com] Sent: Thursday, January 28, 2010 12:47 PM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] CEalign - PyMOL Build Jason, I would LOVE to see CEalign built along with PyMOL. +1 Sean Windows Live Messenger makes it easier to stay in touch - learn how! http://go.microsoft.com/?linkid=9706113 This email (including any attachments) may contain material that is confidential and privileged and is for the sole use of the intended recipient. Any review, reliance or distribution by others or forwarding without express permission is strictly prohibited. If you are not the intended recipient, please contact the sender and delete all copies. Exelixis, Inc. reserves the right, to the extent and under circumstances permitted by applicable law, to retain, monitor and intercept e-mail messages to and from its systems. -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] CEalign - PyMOL Build
Adding my vote to see CE as a native feature in PyMOL. On Tue, Feb 2, 2010 at 2:29 PM, Thomas Juettemann juettem...@gmail.com wrote: +3 from me and people to busy writing grant applications. Built-in CE would be awesome! Thomas On Tue, Feb 2, 2010 at 12:19, Thomas Stout tst...@exelixis.com wrote: I thought that I had +1'd to this last week, but I don't see that note... If legal, I'm also +1-ing for 5 additional people here that do not subscribe to the mailing list... (or should that be +5-ing?) -Tom -Original Message- From: Sean Law [mailto:magic...@hotmail.com] Sent: Thursday, January 28, 2010 12:47 PM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] CEalign - PyMOL Build Jason, I would LOVE to see CEalign built along with PyMOL. +1 Sean Windows Live Messenger makes it easier to stay in touch - learn how! http://go.microsoft.com/?linkid=9706113 This email (including any attachments) may contain material that is confidential and privileged and is for the sole use of the intended recipient. Any review, reliance or distribution by others or forwarding without express permission is strictly prohibited. If you are not the intended recipient, please contact the sender and delete all copies. Exelixis, Inc. reserves the right, to the extent and under circumstances permitted by applicable law, to retain, monitor and intercept e-mail messages to and from its systems. -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Michael Zimmermann Ph.D. student in Bioinformatics and Computational Biology Department of Biochemistry, Biophysics and Molecular Biology Iowa State University -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] CEalign - PyMOL Build
Hi all, So, after updating APBS (pushed to SourceForge) with Michael Lerner, I went ahead and built CEalign into PyMOL. I haven't pushed that code to SourceForge, because I'd like to test it more before releasing it. The way it's packaged in there now, you just compile PyMOL from source and you get cealign for free. Of course, this will make it into the incentive compiled versions, too. Once I'm happy with it, I'll send it up to SourceForge and let everyone know. Regards, -- Jason On Tue, Feb 2, 2010 at 3:29 PM, Thomas Juettemann juettem...@gmail.com wrote: +3 from me and people to busy writing grant applications. Built-in CE would be awesome! Thomas On Tue, Feb 2, 2010 at 12:19, Thomas Stout tst...@exelixis.com wrote: I thought that I had +1'd to this last week, but I don't see that note... If legal, I'm also +1-ing for 5 additional people here that do not subscribe to the mailing list... (or should that be +5-ing?) -Tom -Original Message- From: Sean Law [mailto:magic...@hotmail.com] Sent: Thursday, January 28, 2010 12:47 PM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] CEalign - PyMOL Build Jason, I would LOVE to see CEalign built along with PyMOL. +1 Sean Windows Live Messenger makes it easier to stay in touch - learn how! http://go.microsoft.com/?linkid=9706113 This email (including any attachments) may contain material that is confidential and privileged and is for the sole use of the intended recipient. Any review, reliance or distribution by others or forwarding without express permission is strictly prohibited. If you are not the intended recipient, please contact the sender and delete all copies. Exelixis, Inc. reserves the right, to the extent and under circumstances permitted by applicable law, to retain, monitor and intercept e-mail messages to and from its systems. -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] CEalign - PyMOL Build
Several +1s from all the people here !! -Tom From: Sean Law [mailto:magic...@hotmail.com] Sent: Thursday, January 28, 2010 12:47 PM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] CEalign - PyMOL Build Jason, I would LOVE to see CEalign built along with PyMOL. +1 Sean Windows Live Messenger makes it easier to stay in touch - learn how! http://go.microsoft.com/?linkid=9706113 This email (including any attachments) may contain material that is confidential and privileged and is for the sole use of the intended recipient. Any review, reliance or distribution by others or forwarding without express permission is strictly prohibited. If you are not the intended recipient, please contact the sender and delete all copies. Exelixis, Inc. reserves the right, to the extent and under circumstances permitted by applicable law, to retain, monitor and intercept e-mail messages to and from its systems. -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] CEalign - PyMOL Build
+1 from me -- Justin Lecher Institute for Neuroscience and Biophysics ISB 3 - Institute for structural biochemistry Research Centre Juelich GmbH, 52425 Juelich,Germany phone: +49 2461 61 5385 signature.asc Description: OpenPGP digital signature -- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
[PyMOL] CEalign - PyMOL Build
Jason, I would LOVE to see CEalign built along with PyMOL. +1 Sean _ Say Happy New Year with Messenger for Mobile. http://go.microsoft.com/?linkid=9706117-- The Planet: dedicated and managed hosting, cloud storage, colocation Stay online with enterprise data centers and the best network in the business Choose flexible plans and management services without long-term contracts Personal 24x7 support from experience hosting pros just a phone call away. http://p.sf.net/sfu/theplanet-com___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
