Re: [R-pkg-devel] object 'nativeRoutines' not found
FYI, the problem just fixed itself. On 10/8/18 2:52 PM, Guido Kraemer wrote: Thanks for looking into this: - I deleted the travis cache and it did not help. - R should update all its packages before attempting to install the coRanking package, so old packages shouldn't be a problem. So I guess I should just wait until R-devel on travis gets updated. On 10/08/2018 01:50 PM, Duncan Murdoch wrote: On 08/10/2018 7:47 AM, Duncan Murdoch wrote: On 08/10/2018 7:37 AM, Gábor Csárdi wrote: The package versions are in the output: https://travis-ci.org/gdkrmr/coRanking/jobs/428661435#L2836 I would just try to purge the cache on Travis, that often helps with incompatible package versions. I see "fansi", "mime" and "R6" are out of date. There may be others; those are just from the ones that update.packages() updated on my system (so they are probably recent releases). And R itself: travis is using revision 75381 from Sept 29; current R-devel is 75412. Duncan Murdoch Gabor On Mon, Oct 8, 2018 at 12:34 PM Duncan Murdoch wrote: On 08/10/2018 7:08 AM, Guido Kraemer wrote: Hi all, update: I submitted to CRAN and it passes all test just fine (https://cran.r-project.org/web/checks/check_results_coRanking.html). I still have no idea why travis fails. That looks as though the travis system isn't using the latest version of some package. Can you see sessionInfo() on the two systems? It prints versions for R and for all used packages. Look for differences there. Duncan Murdoch Best Regards, Guido Kraemer On 09/17/2018 05:45 PM, Guido Kraemer wrote: Hi all, Since a couple of days travis-ci fails for my package coRanking with "R: devel". The error message is: Error in nativeRoutines[[lib]] <- routines : object 'nativeRoutines' not found "R: release" and "R: oldrel" work fine. Did some R internals change or is the "R: devel" on travis currently broken? I also sent the package to winbuilder and it works fine with R-devel You can find the travis build here: https://travis-ci.org/gdkrmr/coRanking/jobs/428661435 Best Regards, Guido __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel -- Guido Kraemer Max Planck Institute for Biogeochemistry Jena Department for Biogeochemical Integration Hans-Knöll-Str. 10 07745 Jena Germany phone: +49 3641 576293 e-mail: gkrae...@bgc-jena.mpg.de __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Re: [R-pkg-devel] object 'nativeRoutines' not found
Thanks for looking into this: - I deleted the travis cache and it did not help. - R should update all its packages before attempting to install the coRanking package, so old packages shouldn't be a problem. So I guess I should just wait until R-devel on travis gets updated. On 10/08/2018 01:50 PM, Duncan Murdoch wrote: On 08/10/2018 7:47 AM, Duncan Murdoch wrote: On 08/10/2018 7:37 AM, Gábor Csárdi wrote: The package versions are in the output: https://travis-ci.org/gdkrmr/coRanking/jobs/428661435#L2836 I would just try to purge the cache on Travis, that often helps with incompatible package versions. I see "fansi", "mime" and "R6" are out of date. There may be others; those are just from the ones that update.packages() updated on my system (so they are probably recent releases). And R itself: travis is using revision 75381 from Sept 29; current R-devel is 75412. Duncan Murdoch Gabor On Mon, Oct 8, 2018 at 12:34 PM Duncan Murdoch wrote: On 08/10/2018 7:08 AM, Guido Kraemer wrote: Hi all, update: I submitted to CRAN and it passes all test just fine (https://cran.r-project.org/web/checks/check_results_coRanking.html). I still have no idea why travis fails. That looks as though the travis system isn't using the latest version of some package. Can you see sessionInfo() on the two systems? It prints versions for R and for all used packages. Look for differences there. Duncan Murdoch Best Regards, Guido Kraemer On 09/17/2018 05:45 PM, Guido Kraemer wrote: Hi all, Since a couple of days travis-ci fails for my package coRanking with "R: devel". The error message is: Error in nativeRoutines[[lib]] <- routines : object 'nativeRoutines' not found "R: release" and "R: oldrel" work fine. Did some R internals change or is the "R: devel" on travis currently broken? I also sent the package to winbuilder and it works fine with R-devel You can find the travis build here: https://travis-ci.org/gdkrmr/coRanking/jobs/428661435 Best Regards, Guido __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel -- Guido Kraemer Max Planck Institute for Biogeochemistry Jena Department for Biogeochemical Integration Hans-Knöll-Str. 10 07745 Jena Germany phone: +49 3641 576293 e-mail: gkrae...@bgc-jena.mpg.de __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Re: [R-pkg-devel] object 'nativeRoutines' not found
On 08/10/2018 7:47 AM, Duncan Murdoch wrote: On 08/10/2018 7:37 AM, Gábor Csárdi wrote: The package versions are in the output: https://travis-ci.org/gdkrmr/coRanking/jobs/428661435#L2836 I would just try to purge the cache on Travis, that often helps with incompatible package versions. I see "fansi", "mime" and "R6" are out of date. There may be others; those are just from the ones that update.packages() updated on my system (so they are probably recent releases). And R itself: travis is using revision 75381 from Sept 29; current R-devel is 75412. Duncan Murdoch Gabor On Mon, Oct 8, 2018 at 12:34 PM Duncan Murdoch wrote: On 08/10/2018 7:08 AM, Guido Kraemer wrote: Hi all, update: I submitted to CRAN and it passes all test just fine (https://cran.r-project.org/web/checks/check_results_coRanking.html). I still have no idea why travis fails. That looks as though the travis system isn't using the latest version of some package. Can you see sessionInfo() on the two systems? It prints versions for R and for all used packages. Look for differences there. Duncan Murdoch Best Regards, Guido Kraemer On 09/17/2018 05:45 PM, Guido Kraemer wrote: Hi all, Since a couple of days travis-ci fails for my package coRanking with "R: devel". The error message is: Error in nativeRoutines[[lib]] <- routines : object 'nativeRoutines' not found "R: release" and "R: oldrel" work fine. Did some R internals change or is the "R: devel" on travis currently broken? I also sent the package to winbuilder and it works fine with R-devel You can find the travis build here: https://travis-ci.org/gdkrmr/coRanking/jobs/428661435 Best Regards, Guido __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Re: [R-pkg-devel] object 'nativeRoutines' not found
On 08/10/2018 7:37 AM, Gábor Csárdi wrote: The package versions are in the output: https://travis-ci.org/gdkrmr/coRanking/jobs/428661435#L2836 I would just try to purge the cache on Travis, that often helps with incompatible package versions. I see "fansi", "mime" and "R6" are out of date. There may be others; those are just from the ones that update.packages() updated on my system (so they are probably recent releases). Duncan Murdoch Gabor On Mon, Oct 8, 2018 at 12:34 PM Duncan Murdoch wrote: On 08/10/2018 7:08 AM, Guido Kraemer wrote: Hi all, update: I submitted to CRAN and it passes all test just fine (https://cran.r-project.org/web/checks/check_results_coRanking.html). I still have no idea why travis fails. That looks as though the travis system isn't using the latest version of some package. Can you see sessionInfo() on the two systems? It prints versions for R and for all used packages. Look for differences there. Duncan Murdoch Best Regards, Guido Kraemer On 09/17/2018 05:45 PM, Guido Kraemer wrote: Hi all, Since a couple of days travis-ci fails for my package coRanking with "R: devel". The error message is: Error in nativeRoutines[[lib]] <- routines : object 'nativeRoutines' not found "R: release" and "R: oldrel" work fine. Did some R internals change or is the "R: devel" on travis currently broken? I also sent the package to winbuilder and it works fine with R-devel You can find the travis build here: https://travis-ci.org/gdkrmr/coRanking/jobs/428661435 Best Regards, Guido __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Re: [R-pkg-devel] object 'nativeRoutines' not found
The package versions are in the output: https://travis-ci.org/gdkrmr/coRanking/jobs/428661435#L2836 I would just try to purge the cache on Travis, that often helps with incompatible package versions. Gabor On Mon, Oct 8, 2018 at 12:34 PM Duncan Murdoch wrote: > > On 08/10/2018 7:08 AM, Guido Kraemer wrote: > > Hi all, > > > > update: I submitted to CRAN and it passes all test just fine > > (https://cran.r-project.org/web/checks/check_results_coRanking.html). I > > still have no idea why travis fails. > > > > That looks as though the travis system isn't using the latest version of > some package. Can you see sessionInfo() on the two systems? It prints > versions for R and for all used packages. Look for differences there. > > Duncan Murdoch > > > > Best Regards, > > > > Guido Kraemer > > > > > > On 09/17/2018 05:45 PM, Guido Kraemer wrote: > >> > >> Hi all, > >> > >> Since a couple of days travis-ci fails for my package coRanking with > >> "R: devel". > >> The error message is: > >> > >> Error in nativeRoutines[[lib]] <- routines : > >> object 'nativeRoutines' not found > >> > >> "R: release" and "R: oldrel" work fine. Did some R internals change or > >> is the > >> "R: devel" on travis currently broken? > >> > >> I also sent the package to winbuilder and it works fine with R-devel > >> > >> You can find the travis build here: > >> > >> https://travis-ci.org/gdkrmr/coRanking/jobs/428661435 > >> > >> Best Regards, > >> > >> Guido > >> > >> __ > >> R-package-devel@r-project.org mailing list > >> https://stat.ethz.ch/mailman/listinfo/r-package-devel > > > > __ > R-package-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-package-devel __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Re: [R-pkg-devel] object 'nativeRoutines' not found
On 08/10/2018 7:08 AM, Guido Kraemer wrote: Hi all, update: I submitted to CRAN and it passes all test just fine (https://cran.r-project.org/web/checks/check_results_coRanking.html). I still have no idea why travis fails. That looks as though the travis system isn't using the latest version of some package. Can you see sessionInfo() on the two systems? It prints versions for R and for all used packages. Look for differences there. Duncan Murdoch Best Regards, Guido Kraemer On 09/17/2018 05:45 PM, Guido Kraemer wrote: Hi all, Since a couple of days travis-ci fails for my package coRanking with "R: devel". The error message is: Error in nativeRoutines[[lib]] <- routines : object 'nativeRoutines' not found "R: release" and "R: oldrel" work fine. Did some R internals change or is the "R: devel" on travis currently broken? I also sent the package to winbuilder and it works fine with R-devel You can find the travis build here: https://travis-ci.org/gdkrmr/coRanking/jobs/428661435 Best Regards, Guido __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Re: [R-pkg-devel] object 'nativeRoutines' not found
Hi all, update: I submitted to CRAN and it passes all test just fine (https://cran.r-project.org/web/checks/check_results_coRanking.html). I still have no idea why travis fails. Best Regards, Guido Kraemer On 09/17/2018 05:45 PM, Guido Kraemer wrote: Hi all, Since a couple of days travis-ci fails for my package coRanking with "R: devel". The error message is: Error in nativeRoutines[[lib]] <- routines : object 'nativeRoutines' not found "R: release" and "R: oldrel" work fine. Did some R internals change or is the "R: devel" on travis currently broken? I also sent the package to winbuilder and it works fine with R-devel You can find the travis build here: https://travis-ci.org/gdkrmr/coRanking/jobs/428661435 Best Regards, Guido __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel -- Guido Kraemer Max Planck Institute for Biogeochemistry Jena Department for Biogeochemical Integration Hans-Knöll-Str. 10 07745 Jena Germany phone: +49 3641 576293 e-mail: gkrae...@bgc-jena.mpg.de __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
