The terminal output is attached (it did not crash).
No, I have different problems (simpler than Patrick problems, surely).
Following your suggestion there is nothing to change I did get the
packages I need by downloading the .tar files (from the CRAN-R-project)
and installing them using Rstudio. For now that's working.
Thanks very much,
J Franco
On 4/11/14, 11:34 PM, Simon Urbanek simon.urba...@r-project.org wrote:
On Apr 11, 2014, at 6:33 PM, Jorge Franco jfra...@fagro.edu.uy wrote:
I am an old R beginner, to day installed R 3.1.0 mavericks and am
having troubles (the R -d lldb example below worked for me).
Can you send me the output then?
Do you think we need simply wait for the packages actualization (like
lsmeans, by example)?
Could we do other actions?
Well, unless we find out what's going on, updates won't help since there
is nothing to change.
Are you saying you hit the same problem as Patrick?
Thanks,
Simon
Thank you very much
J Franco
Jorge Franco
Director, Departamento de Biometria y EstadÃstica
Facultad de Agronomia
Universidad de la Republica
Est. Exp. EEMAC, Ruta 3, Km 363
Paysandu
Uruguay
On 4/11/14, 4:28 PM, Simon Urbanek simon.urba...@r-project.org
wrote:
Patrick,
could it be that you have older versions of packages installed that
were
not built for Mavericks? Please check .libPaths() to make sure.
I cannot reproduce the issue, so please provide the output of
sessionInfo() and if you have Xcode 5 installed, please run
then let it crash and type
bt
on the prompt and send us the output.
If you don't have Xcode5 or the above doesn't work, please select
option
1 (abort) in the crash menu and check if you find a crash report.
Thanks,
Simon
On Apr 11, 2014, at 2:58 PM, PatrickT annopo...@gmail.com wrote:
First, sorry if this is a repeat: I just joined the list and don't
know
what has been discussed recently. Thanks for listening!
I just installed the latest version of R (3.1.0). I also reinstalled
the
ggplot2 package. As soon as I execute library(ggplot2) I get the
bomb
message R Session Aborted (in RStudio) or caught segfault message
(in
the R Console).
I'm on Mac OS X Mavericks. I downloaded the Mavericks version, which
is
specifically designed for the new XCode (or something).
I haven't tried on my Linux because I want to keep at least one
working
version of R/RStudio.
I tried to look at the log files here:
Help Menu - Diagnostics - Show Log Files
but they are from last week, which is odd because I use R/RStudio
every
day.
In the R Console:
library(ggplot2)
*** caught segfault ***
address 0x18, cause 'memory not mapped'
Traceback:
1: dyn.load(file, DLLpath = DLLpath, ...)
2: library.dynam(lib, package, package.lib)
3: loadNamespace(j - i[[1L]], c(lib.loc, .libPaths()), versionCheck =
vI[[j]])
4: asNamespace(ns)
5: namespaceImportFrom(ns, loadNamespace(j - i[[1L]], c(lib.loc,
.libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
6: loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
7: namespaceImport(ns, loadNamespace(i, c(lib.loc, .libPaths()),
versionCheck = vI[[i]]), from = package)
8: loadNamespace(package, c(which.lib.loc, lib.loc))
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) {call - conditionCall(e)
if
(!is.null(call)) {if (identical(call[[1L]],
quote(doTryCatch))) call - sys.call(-4L)dcall -
deparse(call)[1L]prefix - paste(Error in, dcall, : )
LONG - 75Lmsg - conditionMessage(e)sm -
strsplit(msg,
\n)[[1L]]w - 14L + nchar(dcall, type = w) + nchar(sm[1L],
type
= w)if (is.na(w)) w - 14L + nchar(dcall, type =
b)
+ nchar(sm[1L], type = b)if (w
LONG) prefix - paste0(prefix, \n )}else prefix
-
Error : msg - paste0(prefix, conditionMessage(e), \n)
.Internal(seterrmessage(msg[1L]))if (!silent
identical(getOption(show.error.messages), TRUE)) {
cat(msg, file = stderr()).Internal(printDeferredWarnings())
}
invisible(structure(msg, class = try-error, condition = e))})
13: try({ns - loadNamespace(package, c(which.lib.loc, lib.loc))
env
- attachNamespace(ns, pos = pos, deps)})
14: library(ggplot2)
Possible actions:
1: abort (with core dump, if enabled)
2: normal R exit
3: exit R without saving workspace
4: exit R saving workspace
Selection:
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