Re: [Rdkit-discuss] SimilarityMaps

2015-02-21 Thread Matthew Lardy
Hi Serenia,

Yep that fixed it!  Thanks!
Matthew

On Fri, Feb 20, 2015 at 10:59 PM, Sereina sereina.rini...@gmail.com wrote:

 Hi Matthew,

 I think this is related to a previous mailing list item (
 https://www.mail-archive.com/rdkit-discuss@lists.sourceforge.net/msg03528.html
 ).

 It has probably something to do with the bounding boxes (they get scaled
 during the map generation process). In the previous case it was enough to
 set bbox_inches='tight' when saving the image to solve the problem.

 I hope this helps.

 Best,
 Sereina


 On 21 Feb 2015, at 02:28, Matthew Lardy mla...@gmail.com wrote:

 Hi,

 I am having an issue with the python similaritymaps.  I am only seeing a
 fraction of the molecule.  Anyone else have this issue?

 Thanks in advance!
 Matthew

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Re: [Rdkit-discuss] SimilarityMaps

2015-02-20 Thread Sereina
Hi Matthew,

I think this is related to a previous mailing list item 
(https://www.mail-archive.com/rdkit-discuss@lists.sourceforge.net/msg03528.html).

It has probably something to do with the bounding boxes (they get scaled during 
the map generation process). In the previous case it was enough to set 
bbox_inches='tight' when saving the image to solve the problem.

I hope this helps.

Best,
Sereina


On 21 Feb 2015, at 02:28, Matthew Lardy mla...@gmail.com wrote:

 Hi,
 
 I am having an issue with the python similaritymaps.  I am only seeing a 
 fraction of the molecule.  Anyone else have this issue?
 
 Thanks in advance!
 Matthew
 --
 Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server
 from Actuate! Instantly Supercharge Your Business Reports and Dashboards
 with Interactivity, Sharing, Native Excel Exports, App Integration  more
 Get technology previously reserved for billion-dollar corporations, FREE
 http://pubads.g.doubleclick.net/gampad/clk?id=190641631iu=/4140/ostg.clktrk___
 Rdkit-discuss mailing list
 Rdkit-discuss@lists.sourceforge.net
 https://lists.sourceforge.net/lists/listinfo/rdkit-discuss

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