[votca] Re: Installing Votca in linux

2011-12-15 Thread rp
Dear Users,I get the following error while installing cmake not
found , below are some lines. Then I installed cmake and tried again
so this send me the error as prefix shoudl start with / as this is
global path . I used as  ./build.sh -prefix ${prefix} --latest tools
csg

Using 9 jobs for makeWorking on toolsDownload tarball votca-
tools-1.2.1.tar.gz from 
http://votca.googlecode.com/files/votca-tools-1.2.1.tar.gz--2011-12-15
13:26:17--  http://votca.googlecode.com/files/votca-
tools-1.2.1.tar.gzResolving votca.googlecode.com...
74.125.65.82Connecting to votca.googlecode.com|74.125.65.82|:80...
connected.HTTP request sent, awaiting response... 200 OKLength: 961500
(939K) [application/x-gzip]Saving to: `votca-tools-1.2.1.tar.gz'
100%[==] 961,500     2.16M/s   in
0.4s
2011-12-15 13:26:18 (2.16 MB/s) - `votca-tools-1.2.1.tar.gz' saved
[961500/961500]
cmake not found

Thanks for any suggestions
On Nov 17, 4:17 pm, Marc Segovia marcsego...@gmail.com wrote:
 Hi

 Provided you have dependecies fine, follow the steps

 prefix=WHERE/TO/INSTALL/VOTCA
 mkdir -p ${prefix}/src
 cd ${prefix}/src
 wgethttp://votca.googlecode.com/hg/build.sh
 chmod +x build.sh
 ./build.sh --prefix ${prefix} tools csg

 maybe you can add gromacs on last line, like this

 ./build.sh --prefix ${prefix} gromacs tools csg

 regards
 Marc
 Universidad de la Republica Uruguay







 On Thu, Nov 17, 2011 at 7:01 PM, rp rakheep...@gmail.com wrote:
  Yes I have seen this installation page . I downloaded Votca and would
  like to know how should I go about installing thisin a linux box or in
  linux cluster.

  Thanks

  On Nov 17, 3:38 pm, Konstantin Koschke konstantin.kosc...@gmail.com
  wrote:
  On Thu, Nov 17, 2011 at 8:22 PM, rp rakheep...@gmail.com wrote:
   Can you send to instructions to install votca in linux.

   Thanks for help

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  Dear rp,

  please be a bit more precise with your problem.

  Did you try followinghttp://code.google.com/p/votca/wiki/Installing?

  cheers,
  konstantin

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Re: [votca] Re: Installing Votca in linux

2011-12-15 Thread Christoph Junghans
Hi rp,

which version of cmake is it?
$cmake --version

Please add the '--debug' option and attach the output.

Cheers,

Christoph

Am 15. Dezember 2011 11:42 schrieb rp rakheep...@gmail.com:
 Dear Users,I get the following error while installing cmake not
 found , below are some lines. Then I installed cmake and tried again
 so this send me the error as prefix shoudl start with / as this is
 global path . I used as  ./build.sh -prefix ${prefix} --latest tools
 csg

 Using 9 jobs for makeWorking on toolsDownload tarball votca-
 tools-1.2.1.tar.gz from 
 http://votca.googlecode.com/files/votca-tools-1.2.1.tar.gz--2011-12-15
 13:26:17--  http://votca.googlecode.com/files/votca-
 tools-1.2.1.tar.gzResolving votca.googlecode.com...
 74.125.65.82Connecting to votca.googlecode.com|74.125.65.82|:80...
 connected.HTTP request sent, awaiting response... 200 OKLength: 961500
 (939K) [application/x-gzip]Saving to: `votca-tools-1.2.1.tar.gz'
 100%[==] 961,500     2.16M/s   in
 0.4s
 2011-12-15 13:26:18 (2.16 MB/s) - `votca-tools-1.2.1.tar.gz' saved
 [961500/961500]
 cmake not found

 Thanks for any suggestions
 On Nov 17, 4:17 pm, Marc Segovia marcsego...@gmail.com wrote:
 Hi

 Provided you have dependecies fine, follow the steps

 prefix=WHERE/TO/INSTALL/VOTCA
 mkdir -p ${prefix}/src
 cd ${prefix}/src
 wgethttp://votca.googlecode.com/hg/build.sh
 chmod +x build.sh
 ./build.sh --prefix ${prefix} tools csg

 maybe you can add gromacs on last line, like this

 ./build.sh --prefix ${prefix} gromacs tools csg

 regards
 Marc
 Universidad de la Republica Uruguay







 On Thu, Nov 17, 2011 at 7:01 PM, rp rakheep...@gmail.com wrote:
  Yes I have seen this installation page . I downloaded Votca and would
  like to know how should I go about installing thisin a linux box or in
  linux cluster.

  Thanks

  On Nov 17, 3:38 pm, Konstantin Koschke konstantin.kosc...@gmail.com
  wrote:
  On Thu, Nov 17, 2011 at 8:22 PM, rp rakheep...@gmail.com wrote:
   Can you send to instructions to install votca in linux.

   Thanks for help

   --
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   To unsubscribe from this group, send email to 
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   For more options, visit this group 
   athttp://groups.google.com/group/votca?hl=en.

  Dear rp,

  please be a bit more precise with your problem.

  Did you try followinghttp://code.google.com/p/votca/wiki/Installing?

  cheers,
  konstantin

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-- 
Christoph Junghans
Web: http://www.compphys.de

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[votca] Re: Installing Votca in linux

2011-12-15 Thread rp
This is cmake 2.8.6 and I am installing votca in Ubuntu11.10. After
installing cmake there is no error .

Where should I add the debug option , please explain

I am installing votca-csg-1.2.1 . I want to make this clarification ,
I was using REDhat linux previously , now I am trying to do this in
Ubuntu .I read the Votca installation page and this says Ubuntu is
still in development . I am sorry if my question is not clear.
I appreciate your help
Thanks
On Dec 15, 7:50 pm, Christoph Junghans jungh...@votca.org wrote:
 Hi rp,

 which version of cmake is it?
 $cmake --version

 Please add the '--debug' option and attach the output.

 Cheers,

 Christoph

 Am 15. Dezember 2011 11:42 schrieb rp rakheep...@gmail.com:









  Dear Users,I get the following error while installing cmake not
  found , below are some lines. Then I installed cmake and tried again
  so this send me the error as prefix shoudl start with / as this is
  global path . I used as  ./build.sh -prefix ${prefix} --latest tools
  csg

  Using 9 jobs for makeWorking on toolsDownload tarball votca-
  tools-1.2.1.tar.gz 
  fromhttp://votca.googlecode.com/files/votca-tools-1.2.1.tar.gz--2011-12-15
  13:26:17--  http://votca.googlecode.com/files/votca-
  tools-1.2.1.tar.gzResolving votca.googlecode.com...
  74.125.65.82Connecting to votca.googlecode.com|74.125.65.82|:80...
  connected.HTTP request sent, awaiting response... 200 OKLength: 961500
  (939K) [application/x-gzip]Saving to: `votca-tools-1.2.1.tar.gz'
  100%[==] 961,500     2.16M/s   in
  0.4s
  2011-12-15 13:26:18 (2.16 MB/s) - `votca-tools-1.2.1.tar.gz' saved
  [961500/961500]
  cmake not found

  Thanks for any suggestions
  On Nov 17, 4:17 pm, Marc Segovia marcsego...@gmail.com wrote:
  Hi

  Provided you have dependecies fine, follow the steps

  prefix=WHERE/TO/INSTALL/VOTCA
  mkdir -p ${prefix}/src
  cd ${prefix}/src
  wgethttp://votca.googlecode.com/hg/build.sh
  chmod +x build.sh
  ./build.sh --prefix ${prefix} tools csg

  maybe you can add gromacs on last line, like this

  ./build.sh --prefix ${prefix} gromacs tools csg

  regards
  Marc
  Universidad de la Republica Uruguay

  On Thu, Nov 17, 2011 at 7:01 PM, rp rakheep...@gmail.com wrote:
   Yes I have seen this installation page . I downloaded Votca and would
   like to know how should I go about installing thisin a linux box or in
   linux cluster.

   Thanks

   On Nov 17, 3:38 pm, Konstantin Koschke konstantin.kosc...@gmail.com
   wrote:
   On Thu, Nov 17, 2011 at 8:22 PM, rp rakheep...@gmail.com wrote:
Can you send to instructions to install votca in linux.

Thanks for help

--
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athttp://groups.google.com/group/votca?hl=en.

   Dear rp,

   please be a bit more precise with your problem.

   Did you try followinghttp://code.google.com/p/votca/wiki/Installing?

   cheers,
   konstantin

   --
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 --
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 Web:http://www.compphys.de

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Re: [votca] Re: Installing Votca in linux

2011-12-15 Thread Christoph Junghans
Just run:
$ ./build.sh --debug -prefix ${prefix} --latest tools csg



Am 15. Dezember 2011 19:46 schrieb rp rakheep...@gmail.com:
 This is cmake 2.8.6 and I am installing votca in Ubuntu11.10. After
 installing cmake there is no error .

 Where should I add the debug option , please explain

 I am installing votca-csg-1.2.1 . I want to make this clarification ,
 I was using REDhat linux previously , now I am trying to do this in
 Ubuntu .I read the Votca installation page and this says Ubuntu is
 still in development . I am sorry if my question is not clear.
 I appreciate your help
 Thanks
 On Dec 15, 7:50 pm, Christoph Junghans jungh...@votca.org wrote:
 Hi rp,

 which version of cmake is it?
 $cmake --version

 Please add the '--debug' option and attach the output.

 Cheers,

 Christoph

 Am 15. Dezember 2011 11:42 schrieb rp rakheep...@gmail.com:









  Dear Users,I get the following error while installing cmake not
  found , below are some lines. Then I installed cmake and tried again
  so this send me the error as prefix shoudl start with / as this is
  global path . I used as  ./build.sh -prefix ${prefix} --latest tools
  csg

  Using 9 jobs for makeWorking on toolsDownload tarball votca-
  tools-1.2.1.tar.gz 
  fromhttp://votca.googlecode.com/files/votca-tools-1.2.1.tar.gz--2011-12-15
  13:26:17--  http://votca.googlecode.com/files/votca-
  tools-1.2.1.tar.gzResolving votca.googlecode.com...
  74.125.65.82Connecting to votca.googlecode.com|74.125.65.82|:80...
  connected.HTTP request sent, awaiting response... 200 OKLength: 961500
  (939K) [application/x-gzip]Saving to: `votca-tools-1.2.1.tar.gz'
  100%[==] 961,500     2.16M/s   in
  0.4s
  2011-12-15 13:26:18 (2.16 MB/s) - `votca-tools-1.2.1.tar.gz' saved
  [961500/961500]
  cmake not found

  Thanks for any suggestions
  On Nov 17, 4:17 pm, Marc Segovia marcsego...@gmail.com wrote:
  Hi

  Provided you have dependecies fine, follow the steps

  prefix=WHERE/TO/INSTALL/VOTCA
  mkdir -p ${prefix}/src
  cd ${prefix}/src
  wgethttp://votca.googlecode.com/hg/build.sh
  chmod +x build.sh
  ./build.sh --prefix ${prefix} tools csg

  maybe you can add gromacs on last line, like this

  ./build.sh --prefix ${prefix} gromacs tools csg

  regards
  Marc
  Universidad de la Republica Uruguay

  On Thu, Nov 17, 2011 at 7:01 PM, rp rakheep...@gmail.com wrote:
   Yes I have seen this installation page . I downloaded Votca and would
   like to know how should I go about installing thisin a linux box or in
   linux cluster.

   Thanks

   On Nov 17, 3:38 pm, Konstantin Koschke konstantin.kosc...@gmail.com
   wrote:
   On Thu, Nov 17, 2011 at 8:22 PM, rp rakheep...@gmail.com wrote:
Can you send to instructions to install votca in linux.

Thanks for help

--
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votca+unsubscr...@googlegroups.com.
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athttp://groups.google.com/group/votca?hl=en.

   Dear rp,

   please be a bit more precise with your problem.

   Did you try followinghttp://code.google.com/p/votca/wiki/Installing?

   cheers,
   konstantin

   --
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 --
 Christoph Junghans
 Web:http://www.compphys.de

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[votca] Re: Installing Votca in linux

2011-12-15 Thread rp
This is what I get after the command line

+ shift
+ [[ -prefix = -* ]]
+ [[ -prefix = --*=* ]]
+ [[ -prefix = -[^-]?* ]]
+ [[ -prefix = -[jpD]* ]]
+ set -- -p refix --latest tools csg
+ case $1 in
+ prefix=refix
+ shift 2
+ [[ --latest = -* ]]
+ [[ --latest = --*=* ]]
+ [[ --latest = -[^-]?* ]]
+ case $1 in
+ rel=1.2.1
+ shift
+ [[ tools = -* ]]
+ version_check -q
++ get_version ./build.sh
++ sed -ne 's/^#version[[:space:]]*\([^[:space:]]*\)[[:space:]]*-- .*$/
\1/p' ./build.sh
++ sed -n '$p'
+ old_version=1.7.8
+ '[' -q = -q ']'
++ get_webversion -q
++ local version
++ '[' -q = -q ']'
+++ wget -qO- http://votca.googlecode.com/hg/build.sh
+++ get_version
+++ sed -ne 's/^#version[[:space:]]*\([^[:space:]]*\)[[:space:]]*-- .*
$/\1/p'
+++ sed -n '$p'
++ version=1.7.8
++ echo 1.7.8
+ new_version=1.7.8
+ '[' -q = -q ']'
+ '[' -q = -q ']'
+ expr 1.7.8 '' 1.7.8
+ return 1
+ [[ -z tools ]]
+ [[ -z refix ]]
+ [[ refix = *WHERE/TO/INSTALL/VOTCA* ]]
+ [[ refix = /* ]]
+ die 'prefix has to be a global path (should start with a '\''/'\'')'
+ [[ -n prefix has to be a global path (should start with a '/') ]]
+ cecho RED 'prefix has to be a global path (should start with a
'\''/'\'')'
+ local opts color 'colors=BLUE CYAN CYANN GREEN RED PURP'
+ [[ RED = -?* ]]
+ [[ -z prefix has to be a global path (should start with a '/') ]]
+ is_in RED 'BLUE CYAN CYANN GREEN RED PURP'
+ [[ -z RED ]]
+ [[ -z BLUE CYAN CYANN GREEN RED PURP ]]
+ [[  BLUE CYAN CYANN GREEN RED PURP  = *\ \R\E\D\ * ]]
+ color=''
+ shift
+ echo -n ''
+ echo -ne 'prefix has to be a global path (should start with a
'\''/'\'')'
prefix has to be a global path (should start with a '/')+ echo ''

+ exit 1

Thanks for your time. I appreciate


On Dec 15, 10:00 pm, Christoph Junghans jungh...@votca.org wrote:
 Just run:
 $ ./build.sh --debug -prefix ${prefix} --latest tools csg

 Am 15. Dezember 2011 19:46 schrieb rp rakheep...@gmail.com:









  This is cmake 2.8.6 and I am installing votca in Ubuntu11.10. After
  installing cmake there is no error .

  Where should I add the debug option , please explain

  I am installing votca-csg-1.2.1 . I want to make this clarification ,
  I was using REDhat linux previously , now I am trying to do this in
  Ubuntu .I read the Votca installation page and this says Ubuntu is
  still in development . I am sorry if my question is not clear.
  I appreciate your help
  Thanks
  On Dec 15, 7:50 pm, Christoph Junghans jungh...@votca.org wrote:
  Hi rp,

  which version of cmake is it?
  $cmake --version

  Please add the '--debug' option and attach the output.

  Cheers,

  Christoph

  Am 15. Dezember 2011 11:42 schrieb rp rakheep...@gmail.com:

   Dear Users,I get the following error while installing cmake not
   found , below are some lines. Then I installed cmake and tried again
   so this send me the error as prefix shoudl start with / as this is
   global path . I used as  ./build.sh -prefix ${prefix} --latest tools
   csg

   Using 9 jobs for makeWorking on toolsDownload tarball votca-
   tools-1.2.1.tar.gz 
   fromhttp://votca.googlecode.com/files/votca-tools-1.2.1.tar.gz--2011-12-15
   13:26:17--  http://votca.googlecode.com/files/votca-
   tools-1.2.1.tar.gzResolving votca.googlecode.com...
   74.125.65.82Connecting to votca.googlecode.com|74.125.65.82|:80...
   connected.HTTP request sent, awaiting response... 200 OKLength: 961500
   (939K) [application/x-gzip]Saving to: `votca-tools-1.2.1.tar.gz'
   100%[==] 961,500     2.16M/s   in
   0.4s
   2011-12-15 13:26:18 (2.16 MB/s) - `votca-tools-1.2.1.tar.gz' saved
   [961500/961500]
   cmake not found

   Thanks for any suggestions
   On Nov 17, 4:17 pm, Marc Segovia marcsego...@gmail.com wrote:
   Hi

   Provided you have dependecies fine, follow the steps

   prefix=WHERE/TO/INSTALL/VOTCA
   mkdir -p ${prefix}/src
   cd ${prefix}/src
   wgethttp://votca.googlecode.com/hg/build.sh
   chmod +x build.sh
   ./build.sh --prefix ${prefix} tools csg

   maybe you can add gromacs on last line, like this

   ./build.sh --prefix ${prefix} gromacs tools csg

   regards
   Marc
   Universidad de la Republica Uruguay

   On Thu, Nov 17, 2011 at 7:01 PM, rp rakheep...@gmail.com wrote:
Yes I have seen this installation page . I downloaded Votca and would
like to know how should I go about installing thisin a linux box or in
linux cluster.

Thanks

On Nov 17, 3:38 pm, Konstantin Koschke konstantin.kosc...@gmail.com
wrote:
On Thu, Nov 17, 2011 at 8:22 PM, rp rakheep...@gmail.com wrote:
 Can you send to instructions to install votca in linux.

 Thanks for help

 --
 You received this message because you are subscribed to the Google 
 Groups votca group.
 To post to this group, send email to votca@googlegroups.com.
 To unsubscribe from this group, send email to 
 votca+unsubscr...@googlegroups.com.
 For more options, visit this group 
 athttp://groups.google.com/group/votca?hl=en.


[votca] Re: Installing Votca in linux

2011-12-15 Thread rp
Following my previous message I reinstalled cmake and tried the steps
again to configure votca, this provides me with a different error as
below
Looking for sqrt in m - found-- Could NOT find BoostCMake Error at src/
CMakeLists.txt:5 (message):  Boost not found, make sure you have also
installed boost and it's dev  package or use our internal replacement
set -DEXTERNAL_BOOST=OFF

-- Configuring incomplete, errors occurred!
Can someone tell me how can I turn DEEXTERNAL_BOOST=OFF
Thanks

On Dec 15, 10:35 pm, rp rakheep...@gmail.com wrote:
 This is what I get after the command line

 + shift
 + [[ -prefix = -* ]]
 + [[ -prefix = --*=* ]]
 + [[ -prefix = -[^-]?* ]]
 + [[ -prefix = -[jpD]* ]]
 + set -- -p refix --latest tools csg
 + case $1 in
 + prefix=refix
 + shift 2
 + [[ --latest = -* ]]
 + [[ --latest = --*=* ]]
 + [[ --latest = -[^-]?* ]]
 + case $1 in
 + rel=1.2.1
 + shift
 + [[ tools = -* ]]
 + version_check -q
 ++ get_version ./build.sh
 ++ sed -ne 's/^#version[[:space:]]*\([^[:space:]]*\)[[:space:]]*-- .*$/
 \1/p' ./build.sh
 ++ sed -n '$p'
 + old_version=1.7.8
 + '[' -q = -q ']'
 ++ get_webversion -q
 ++ local version
 ++ '[' -q = -q ']'
 +++ wget -qO-http://votca.googlecode.com/hg/build.sh
 +++ get_version
 +++ sed -ne 's/^#version[[:space:]]*\([^[:space:]]*\)[[:space:]]*-- .*
 $/\1/p'
 +++ sed -n '$p'
 ++ version=1.7.8
 ++ echo 1.7.8
 + new_version=1.7.8
 + '[' -q = -q ']'
 + '[' -q = -q ']'
 + expr 1.7.8 '' 1.7.8
 + return 1
 + [[ -z tools ]]
 + [[ -z refix ]]
 + [[ refix = *WHERE/TO/INSTALL/VOTCA* ]]
 + [[ refix = /* ]]
 + die 'prefix has to be a global path (should start with a '\''/'\'')'
 + [[ -n prefix has to be a global path (should start with a '/') ]]
 + cecho RED 'prefix has to be a global path (should start with a
 '\''/'\'')'
 + local opts color 'colors=BLUE CYAN CYANN GREEN RED PURP'
 + [[ RED = -?* ]]
 + [[ -z prefix has to be a global path (should start with a '/') ]]
 + is_in RED 'BLUE CYAN CYANN GREEN RED PURP'
 + [[ -z RED ]]
 + [[ -z BLUE CYAN CYANN GREEN RED PURP ]]
 + [[  BLUE CYAN CYANN GREEN RED PURP  = *\ \R\E\D\ * ]]
 + color=''
 + shift
 + echo -n ''
 + echo -ne 'prefix has to be a global path (should start with a
 '\''/'\'')'
 prefix has to be a global path (should start with a '/')+ echo ''

 + exit 1

 Thanks for your time. I appreciate

 On Dec 15, 10:00 pm, Christoph Junghans jungh...@votca.org wrote:







  Just run:
  $ ./build.sh --debug -prefix ${prefix} --latest tools csg

  Am 15. Dezember 2011 19:46 schrieb rp rakheep...@gmail.com:

   This is cmake 2.8.6 and I am installing votca in Ubuntu11.10. After
   installing cmake there is no error .

   Where should I add the debug option , please explain

   I am installing votca-csg-1.2.1 . I want to make this clarification ,
   I was using REDhat linux previously , now I am trying to do this in
   Ubuntu .I read the Votca installation page and this says Ubuntu is
   still in development . I am sorry if my question is not clear.
   I appreciate your help
   Thanks
   On Dec 15, 7:50 pm, Christoph Junghans jungh...@votca.org wrote:
   Hi rp,

   which version of cmake is it?
   $cmake --version

   Please add the '--debug' option and attach the output.

   Cheers,

   Christoph

   Am 15. Dezember 2011 11:42 schrieb rp rakheep...@gmail.com:

Dear Users,I get the following error while installing cmake not
found , below are some lines. Then I installed cmake and tried again
so this send me the error as prefix shoudl start with / as this is
global path . I used as  ./build.sh -prefix ${prefix} --latest tools
csg

Using 9 jobs for makeWorking on toolsDownload tarball votca-
tools-1.2.1.tar.gz 
fromhttp://votca.googlecode.com/files/votca-tools-1.2.1.tar.gz--2011-12-15
13:26:17--  http://votca.googlecode.com/files/votca-
tools-1.2.1.tar.gzResolving votca.googlecode.com...
74.125.65.82Connecting to votca.googlecode.com|74.125.65.82|:80...
connected.HTTP request sent, awaiting response... 200 OKLength: 961500
(939K) [application/x-gzip]Saving to: `votca-tools-1.2.1.tar.gz'
100%[==] 961,500     2.16M/s   in
0.4s
2011-12-15 13:26:18 (2.16 MB/s) - `votca-tools-1.2.1.tar.gz' saved
[961500/961500]
cmake not found

Thanks for any suggestions
On Nov 17, 4:17 pm, Marc Segovia marcsego...@gmail.com wrote:
Hi

Provided you have dependecies fine, follow the steps

prefix=WHERE/TO/INSTALL/VOTCA
mkdir -p ${prefix}/src
cd ${prefix}/src
wgethttp://votca.googlecode.com/hg/build.sh
chmod +x build.sh
./build.sh --prefix ${prefix} tools csg

maybe you can add gromacs on last line, like this

./build.sh --prefix ${prefix} gromacs tools csg

regards
Marc
Universidad de la Republica Uruguay

On Thu, Nov 17, 2011 at 7:01 PM, rp rakheep...@gmail.com wrote:
 Yes I have seen this installation page . I downloaded Votca and 
 would
 like to know how should I go about