in the rotational and translational motion to see if any further
matching is needed.
From:
<freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>>
on behalf of "Buckless, Colleen"
<buckl...@kennedykrieger.org<mailto:buckl...@kennedykrieger.org>
...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>
[freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Buckless, Colleen
[buckl...@kennedykrieger.org]
Sent: Friday, July 14, 2017 3:35 PM
To: 'freesurfer@nmr.mgh.harvard.edu'
Subject: [Freesurfer] dmri_motion -T threshold
Hi All,
I've been using dmri_motion to quantify motion in our DTI data. We are
uncertain how to determine what the -T threshold should be. We have read
through the wiki and the related papers and are confused what this number
represents, how it effects the output, and the rational for
;? If it cannot find nu_correct on your path, do you mind telling me
the method you use to source FS?
Thanks,
Andrew
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Buckless, Colleen
<buckl...@kenned
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Buckless, Colleen
<buckl...@kennedykrieger.org>
Sent: Wednesday, July 05, 2017 12:18 PM
To: 'freesurfer@nmr.mgh.harvard.edu'
Subject: [Freesurfer] error message
Hi All,
I am using the newest version of freesurfer, and I keep getting errors when I
run recon-all -autorecon1. It appears that the error might have to do with
nu_correct, and I have attached the recon-all.log.
Any suggestions on how to fix this?
Thanks,
Colleen Buckless
Research Assistant
Hi All,
I have already preprocessed data in FSL and only want to use TRACULA to get the
motion measures to match subjects based on motion. Is there any way I can get
out the motion measures without doing all of the other preprocessing steps in
TRACULA?
Thanks,
Colleen Buckless
