Re: [API-users] Occurrence download API throwing 406 errors

Please let us know if that fixes the issue and if we can assist you in any > other way. > > Best, Federico. > > On 04/12/2018, 00.07, "API-users on behalf of Scott Chamberlain" > wrote: > > Hi, > > The occurrence download API has been throwing 406 errors for s

Re: [API-users] Multiple taxonKey values with maps API ?

. The layer for > these tiles is always "occurrence", so it doesn't quite work. > > https://labs.gbif.org/~mblissett/2018/08/concatenate-vector-tiles/ has a > hack to make this work, but it's probably just as easy to add multiple > layers to a map. > > Matt > > On

[API-users] Multiple taxonKey values with maps API ?

Hello! Are there any plans to allow passing any of the primary parameters (taxonKey, datasetKey, country, publishingOrg, publishingCountry) more than once. e.g. ...?taxonKey=1=2 or comma separated. Perhaps up to some max number? Or is there a good reason not to suppor that? Woud it lead to

Re: [API-users] Some geometry searches seem to not be working

Another user of a package that uses rgbif reported I think the same problem https://github.com/ropensci/spocc/issues/187 Best, Scott On Tue, May 15, 2018 at 7:54 AM Scott Chamberlain <myrmecocys...@gmail.com> wrote: > Hi, > > Users of rgbif have been reporting problems with geo

[API-users] Some geometry searches seem to not be working

Hi, Users of rgbif have been reporting problems with geometry parameter in /occurrence route not working sometimes. It does indeed appear to work sometimes, but other times, it appears I think to be using latitude, but ignoring longitude. It's hard to give reproducible examples for command line

Re: [API-users] (no subject)

s used. > I have fixed this in the master branch now and will deploy it to > production in the next hours. > > > Markus > > > On 5. Apr 2018, at 23:26, Scott Chamberlain <myrmecocys...@gmail.com> > wrote: > > Hi all, > > Dimiano (in CC) has identified a potential pr

[API-users] (no subject)

Hi all, Dimiano (in CC) has identified a potential problem with the species API. see https://github.com/ropensci/rgbif/issues/299 In particular the /species/search route. The gist is that we think there's duplicates returned when paging through that route for a given search. This comment

[API-users] /species route question/possible problem

kus > > > > On 8. Feb 2018, at 19:28, Scott Chamberlain > wrote: > > > > Hi Markus, > > > > Thanks very much for your help on this. That seems like a good solution. > > > > Does the only 1 instance of a parameter per request apply to the other

[API-users] Getting all results for a given search filter

You can do pagination with limit and offset parameters. For example; http://api.gbif.org/v1/occurrence/search?taxonKey=1=25 Can set limit up to 300. Use offset parameter to get next set of results. Though if you want to get *A LOT* of data as it seems you do, using the async download service is

[API-users] Clarification on limit defaults and max values for some routes

Hi all, I don't remember what API behavior and documentation used to be like, but for some routes the behavior and docs don't seem ideal. For example, for name usages, I don't see any docs on default and max limit/offset values. As far as I can tell, only occurrences routes have that information.

[API-users] /occurrence/download route sometimes give size: 0

Thanks a lot! On Sun, Nov 12, 2017 at 11:50 PM Federico Mendez wrote: > Hi Scott, you?re right about this issue, I?ll investigate what?s happening > there. > > Bests, Federico Mendez. > > From: API-users on behalf of Scott > Chamberlain > Date: Friday 10 November

[API-users] How to query genus names with the GBIF API

Have you tried something like http://api.gbif.org/v1/species/search?datasetkey=d7dddbf4-2cf0-4f39-9b2a-bb099caae36c=GENUS where datasetkey=d7dddbf4-2cf0-4f39-9b2a-bb099caae36c is for the GBIF backbone taxonomy Scott On Wed, Sep 6, 2017 at 2:10 PM Szlamka J?zsef wrote: > Hello to all list

[API-users] Queueing download requests?

Hi, Recently was reading this issue http://dev.gbif.org/issues/browse/POR-2734?jql=text%20~%20%22420%20http%22 and wondering if GBIF might be willing to queue requests, and just fire them off when they're allowed to run, instead of the user doing 1 too many then getting 420. I have no knowledge

[API-users] Download API: support many predicates?

;, > "key": "HAS_GEOSPATIAL_ISSUE", > "value": "false" > }, > { > "type": "greaterThanOrEquals", > "key": "YEAR"

[API-users] Backbone data as SQL

Hi Chris, I started something a while back to automate building a SQLite version of the backbone taxonomy ( https://github.com/ropensci/gbif-backbone-sql) but it's not quite done yet. Idea is to run on Heroku (e.g., once a day), resulting in a fresh SQLite version of the backbone taxonomy on

[API-users] Error in /dataset route

Hi, Found that in pygbif test suite, this request http://api.gbif.org/v1/dataset gives Invalid metadata xml document All other tests are passing. Best, Scott -- next part -- An HTML attachment was scrubbed... URL:

[API-users] MULTIPOLYGON support appears to be gone?

api.gbif-uat.org/v1/occurrence/search?GEOMETRY=MULTIPOLYGON(((30%2020,%2045%2040,%2010%2040,%2030%2020)),((15%205,%2040%2010,%2010%2020,%205%2010,%2015%205))) > > Thanks, > Tim > > > From: API-users on behalf of Scott > Chamberlain > Date: Wednesday 5 October 2016 at 21:32 >

[API-users] Reporting bugs/etc with GBIF API?

y, and links are > below for anyone following this thread. > > Thanks, > Tim > > > [1] http://dev.gbif.org/issues/browse/POR-3125 > [2] http://dev.gbif.org/issues/browse/POR-3173 > [3] http://dev.gbif.org/issues/browse/POR-2809 > [4] http://dev.gbif.org/issues/br

[API-users] Reporting bugs/etc with GBIF API?

Hi! I just looked over issues I've opened in the GBIF JIRA instance. I noticed that none of the 4 received any comments or action as far as I could tell. Is there a better place to raise issues with the GBIF API? This mailing list? Twitter? A Github repo? Thanks!, Scott -- next part

[API-users] birdhouse meets GBIF

s/sdm.html > > Birdhouse architecture: > > https://github.com/bird-house/birdhouse-docs/blob/master/slides/birdhouse-architecture/birdhouse-architecture.pdf > > Merci > Nils > > Forwarded Message --- > Subject: Re: pygbif for occurrence coordinates >

[API-users] Scientific names questions

one versions: > https://github.com/gbif/backbone-patch > > > Many thanks, > Markus > > > > On 11 May 2016, at 23:22, Scott Chamberlain > wrote: > > HI all, > > Not sure where is best to ask this... so here goes. Let me know if there's > a better place. > &g

[API-users] Scientific names questions

spellings (with 1 or 2 "i"'s) are accepted, and exact matches. The sci. authorities here are exactly the same. The first is from TPL and the second from COL Should I advise users to when searching on the backbone taxonomy to limit to COL to avoid any confusion about names? Bes

[API-users] All enum links from API docs are broken

w.gbif.org > > From: API-users on behalf of Scott > Chamberlain > Date: Friday 18 March 2016 15:50 > To: "api-users at lists.gbif.org" > Subject: [API-users] All enum links from API docs are broken > > E.g., > > > http://gbif.github.io/gbif-api/apidocs/or

[API-users] All enum links from API docs are broken

E.g., http://gbif.github.io/gbif-api/apidocs/org/gbif/api/vocabulary/OccurrenceIssue.html http://gbif.github.io/gbif-api/apidocs/org/gbif/api/vocabulary/Continent.html http://gbif.github.io/gbif-api/apidocs/org/gbif/api/vocabulary/BasisOfRecord.html Scott -- next part --

[API-users] API back up date?

- > what problem are you seeing? > > Oliver > > On Dec 28, 2015, at 18:40, Scott Chamberlain > wrote: > > Hi, > > I realize it's the holidays, so API down time seems fine, but is there a > date that the API is planned to be back up? > > Thanks, Scott > >

[API-users] Counts per degree cell

ck within around 6 months or so > (i.e. the ability to do some faceted results from search - this is a facet > on a grid cell) > > Thanks, > Tim > > > > On 28 Oct 2015, at 19:56, Scott Chamberlain > wrote: > > Hi all! > > AFAIK, what the route http://

[API-users] Counts per degree cell

Hi all! AFAIK, what the route http://data.gbif.org/ws/rest/density/list used to provide is gone, right? If so, I imagine that it was too expensive computationally? If not, might it come back? Some users requesting that kind of data. Thanks! Scott -- next part -- An HTML

[API-users] API Changelog?

retrospectively by going through the commit > history of the API project: > https://github.com/gbif/gbif-api/commits/master > > Do you think this is useful? > > Markus > > > On 15 Sep 2015, at 22:43, Scott Chamberlain > wrote: > > Hi all, > > Is there a change

[API-users] Some questions from a begginer

Note that the R client rgbif does interface with the GBIF download API in addition to the search API - making it easier to deal with larger datasets. This works even if you downloaded bulk data from the GBIF GUI. Ignore this if you don't use R :) Best, S On Wed, Sep 9, 2015 at 10:35 AM Alex

[API-users] 204 response

7ce/stats > > Can you please file an issue? I am on my phone > > In haste, > Tim > > On 31 Jul 2015, at 19:52, Scott Chamberlain > wrote: > > Hi all, > > I am curious as to the reasoning behind the 204 response for some API > requests. For example: > > cu

[API-users] 204 response

Hi all, I am curious as to the reasoning behind the 204 response for some API requests. For example: curl -v ' http://api.gbif.org/v1/dataset/3f8a1297-3259-4700-91fc-acc4170b27ce/metrics' < HTTP/1.1 204 No Content < Content-Type: application/json < Access-Control-Allow-Origin: * * Server

[API-users] coordinateAccurracy field

at 09:24, Tim Robertson wrote: >> > >> > Hi Scott, >> > >> > I don?t recall any coordinateAccurracy but I might be mistaken >> > >> > There are coordinateUncertaintyInMeters and coordinatePrecision - could >> it be those you were thinking of

[API-users] coordinateAccurracy field

gt; > > > Hi Scott, > > > > I don?t recall any coordinateAccurracy but I might be mistaken > > > > There are coordinateUncertaintyInMeters and coordinatePrecision - could > it be those you were thinking of? We only return the verbatim values, and > don?t do an

[API-users] mediaType parameter not working anymore

n 10 Jul 2015, at 07:20, Thompson, Alexander M > wrote: > > Doesn't work via the portal either: > > http://www.gbif.org/occurrence/search?MEDIA_TYPE=StillImage? > > - Alex > > ---------- > *From:* API-users on behalf of Scott > Chamb

[API-users] mediaType parameter not working anymore

Is anyone else having this problem, e.g., http://api.gbif.org/v1/occurrence/search?mediaType=StillImage returns { - offset: 0, - limit: 20, - endOfRecords: true, - count: 0, - results: [ ] } Thanks, Scott -- next part -- An HTML attachment was

[API-users] All /species routes down

rry for the interruption > Tim > > > On 09 Jun 2015, at 21:33, Scott Chamberlain > wrote: > > > All seem to be down right now...Guessing there's some kind of scheduled > maintenance. > > > > Thanks, Scott > > __

[API-users] All /species routes down

All seem to be down right now...Guessing there's some kind of scheduled maintenance. Thanks, Scott -- next part -- An HTML attachment was scrubbed... URL:

[API-users] geometry string length

box search on GBIF, and then using > geometry functions in R to "cookie cutter? the result set to the fine > polygon. > > Is that something you think would be manageable? > > Cheers, > Tim > > > > > > > On 31 Mar 2015, at 00:11, Scott Chamberlain > wro

[API-users] Limit 1000 for /species endpoints?

used > which is returned in each response to accurately page over resources. A > sensible default for all calls is 1000?. > > I hope this helps, > Tim > > > > On 10 Oct 2014, at 01:07, Scott Chamberlain > wrote: > > Hello, > > Is the max value 1000 for the li

[API-users] Remove/filter by data from botanical gardens?

ce/675943831/verbatim > > It is also returned in a search (same dataset as record above): > > http://api.gbif.org/v1/occurrence/search?datasetKey=b6015b60-6f96-43a9-88e5-2f41854e8f07 > > I hope this helps, > Tim > > > > > On 07 Oct 2014, at 20:48, Scot

[API-users] Remove/filter by data from botanical gardens?

Record=LivingSpecimen would get you some of the way there, and > looking into the establishmentMeans a step further, but the some of the > data just don?t have fields to filter them out. > > > > Cheers, > > Tim > > > > > > On 07 Oct 2014, at 03:00, Scott Chamberlain >

[API-users] Remove/filter by data from botanical gardens?

t the some of the > data just don?t have fields to filter them out. > > > > Cheers, > > Tim > > > > > > On 07 Oct 2014, at 03:00, Scott Chamberlain > wrote: > > > >> Hello, > >> > >> Someone brought up recently whether o

[API-users] Remove/filter by data from botanical gardens?

. Is something like this already flagged as an issue in the occurrence issue enum? I didn't see it myself. I guess one could find the data providers that are botanical gardens and exclude those if they are in the search results. Thanks for any guidance. Cheers, Scott Chamberlain -- next part

[API-users] Why is the downloads interface different than other occurrence endpoints?

f, and it would be nice to provide the > same exact interface to users whether they are getting JSON data or > spinning up a download. However, the query interfaces are quite > different. This isn't a big deal, as I can make both occurrence/download > and occurrence/search endpoints as similar as pos

[API-users] Why is the downloads interface different than other occurrence endpoints?

a download. However, the query interfaces are quite different. This isn't a big deal, as I can make both occurrence/download and occurrence/search endpoints as similar as possible for users despite them being different internally. Thanks! Scott Chamberlain -- next part

[API-users] Multimedia examples

gt; > > Hope this is useful to publishers. It surely is really useful for us to spot > problems! > > best, > Markus > > > > > > On 17 Jun 2014, at 17:05, Scott Chamberlain wrote: > >> Hello, >> >> Thanks for the notice of the new mu

[API-users] Multimedia examples

Hello, Thanks for the notice of the new multimedia feature. Are there any new parameters, perhaps a parameter that accepts a logical to limit to records with media data. Cheers, Scott Chamberlain

[API-users] Multimedia examples

Hello, Thanks for the notice of the new multimedia feature. Are there any new parameters, perhaps a parameter that accepts a logical to limit to records with media data. Cheers, Scott Chamberlain