Re: [Artemis-users] ACT - percentage id

Hi Simon ACT uses the output from BLAST. So it is only a local alignment. You probably need to run a global alignment on your sequences to get the overall percentage identity. Regards Tim On 4/11/08 08:42, "Simon Baxter" <[EMAIL PROTECTED]> wrote: > Hello, > I'm comparing two rather divergent

[Artemis-users] ACT - percentage id

Hello, I'm comparing two rather divergent haplotypes, around 150 kb each, using ACT. Is it possible to generate an overall percentage identity between the two sequences, across the entire region? Or does ACT always limit these percent id statistics to smaller, highly conserved blocks of se

Re: [Artemis-users] can artemis lock/checkout a gene from chado

Hi Gowtham Artemis in database mode will not lock the gene. However, if two people edit the same gene it will accept the first changes committed back to the database and warn the second annotator when they commit that changes have been made to that gene. Artemis does this by checking the timelastm