Regarding different Affymetrix type (snp and expression)
BASE 2.5 has implemented support for something called platform and
variants to support different type of chips within a platform (see
http://base.thep.lu.se/chrome/site/latest/html/userdoc/platforms/platforms.html).
In this case we have
Hi Jari,
Thanks for your comments.
On Jan 26, 2008, at 12:43 AM, Jari Häkkinen wrote:
> Nice work. I've successfully tested the apt-summarize plug-in. I do
> not
> have any genotype data so I have to leave that for someone else to
> test.
>
> I miss a short description of the two plug-ins. H
Nice work. I've successfully tested the apt-summarize plug-in. I do not
have any genotype data so I have to leave that for someone else to test.
I miss a short description of the two plug-ins. How to use them and what
to expect from them. Specifically the genotyoe plug-in requires some
addition
Hi all,
A plugin package for execution of the Affymetrix Power Tools apt-
probeset-summarize and apt-probeset-geneotype are available for
download from:
http://madr.lcb.uu.se/browser/plugins/se/uu/lcb/APT/tags/0.2
From this repository you can download a precompiled jar file or the
source c
