Hi all
I am trying to analyse some data from an Affymetrix GeneChip Mouse Gene 1.0
ST Array [MoGene-1_0-st-v1] chip using the RMAexpress plugin and the CDF
file downloaded from Affymetrix. The analysis fails with an exception
(below).
Can you advise me of what the underlying problem might be and
Dear Colleagues,
I'd like to draw your attention to the ISMB call for papers:
ISCB ANNOUNCEMENTS AND U P D A T E S ::
ISMB 2008, July 19-23, Toronto, Canada
Call for Papers Closing in One Week
www.iscb.org/ismb2008/sub_papers.php
Paper Submission Deadline: January 16, 2008
Robert Stevens a
Hi,
I/ I do not know how to filter out a reporter (corresponding to empty
spot) from imported raw data before normalisation (even using Filter
bioassay). Do you have a solution?
II/ Do you known how to calculate t-test p values in base2 ?
II/ At last, do you know a function in base2 for aver
I'm trying to import some genepix raw data files (.gpr) with the raw data
importer. In configuring the plugin, I define the fields and test the file
parsing, but it doesn't recognize the data header line the way I expressed
it. When I select the option to make the 'unknown' line the data header,
t
David Waring wrote:
> I have installed Base2 with PostgreSQL and am in the process of testing
> things out. I have been able to add reporters, plates, arrays, extracts
> hybridizations raw data and experiments. I am trying to analyse an
> experiment so I chose new bioassay set, chose the formula
I have installed Base2 with PostgreSQL and am in the process of
testing things out. I have been able to add reporters, plates,
arrays, extracts hybridizations raw data and experiments. I am trying
to analyse an experiment so I chose new bioassay set, chose the
formulat fg mean - bg median a
