Re: [base] array design GTF import - not 9 columns

2014-05-27 Thread Bob MacCallum
Thanks for the quick reply Nicklas, We'll strip out the comments for now and keep on testing. cheers, Bob On Mon, May 26, 2014 at 7:37 AM, Nicklas Nordborg < nicklas.nordb...@med.lu.se> wrote: > Thanks for testing this. It feels like it was a long time ago this was > implemented and we have not

Re: [base] array design GTF import - not 9 columns

2014-05-25 Thread Nicklas Nordborg
Thanks for testing this. It feels like it was a long time ago this was implemented and we have not really started to use it yet. Anyway, you are correct that the problem is something deeper than the usual importer. To make GTF files parsable by the regular importers, there is a pre-parsing step

Re: [base] array design GTF import - not 9 columns

2014-05-24 Thread Jari Häkkinen
On 2014-05-23 18:17, Bob MacCallum wrote: > [mods please delete the mail I sent from my gmail account, or add me > with that account but with no delivery, thank] Added to the list. For the issue with the GTF I'll let Nicklas respond. Cheers, Jari --

[base] array design GTF import - not 9 columns

2014-05-23 Thread Bob MacCallum
Hi all, [mods please delete the mail I sent from my gmail account, or add me with that account but with no delivery, thank] Just upgraded from 2->3 and now trying out the NGS feaures. Quick question about GTF import for array designs... When doing array design->import the importer is complainin