hi,
Is there a way that I can change the names of the assays slot of a
SummarizedExperiment, without making a new copy of the data contained
within? Assume I get an SE which has already been constructed, but no
names on the assays() SimpleList.
thanks,
Mike
library(GenomicRanges)
gc()
Hi Sebastian,
This is the expected behavior and it's motivated by how [- behaves on
ordinary vectors:
x - setNames(1:3, LETTERS[1:3])
Then:
x
A B C
1 2 3
Replacing the first two elements:
x[2:1] - x[1:2]
Then:
x
A B C
2 1 3
The names are preserved.
So we need to think
On 05/07/2014 12:06 PM, Michael Love wrote:
hi,
Is there a way that I can change the names of the assays slot of a
SummarizedExperiment, without making a new copy of the data contained
within? Assume I get an SE which has already been constructed, but no
names on the assays() SimpleList.
Hi
Hi Hervé,
thanks for the explanation. I never recognized that this happens with ordinary
vectors, too.
Of course, I see that it would be a bad style to overload [- for my own
class to behave like I want to.
So I need to update the metadata manually.
Kind regards,
Sebastian
On 2014-05-07
I maintain a collection of Debian packages of CRAN and BioC[1] for
public use; currently, whenever BioC makes a new release, it requires
manual intervention for me to point at the new release location.
It would be helpful if there was a
http://www.bioconductor.org/packages/current redirect to the
Hi Don --
On 05/07/2014 06:21 PM, Don Armstrong wrote:
I maintain a collection of Debian packages of CRAN and BioC[1] for
public use; currently, whenever BioC makes a new release, it requires
manual intervention for me to point at the new release location.
It would be helpful if there was a
- Original Message -
From: Martin Morgan mtmor...@fhcrc.org
To: bioc-devel@r-project.org
Sent: Wednesday, May 7, 2014 10:07:10 PM
Subject: Re: [Bioc-devel] Tracking Current release
(http://www.bioconductor.org/packages/current redirect to
http://www.bioconductor.org/packages/2.14)
