Hi, last night I received an automatic message regardless the flagme
package (I'm the co-author and the manteiner):
o ERROR for 'R CMD build' on zin2. See the details here:
http://bioconductor.org/checkResults/3.1/bioc-LATEST/flagme/zin2-buildsrc.html
I followed the link above and I see the
Salut Hervé,
It sounds great, but according to the man page, snpsById() requires an
'XtraSNPlocs' object, and the only one availble on bioconductor is
'XtraSNPlocs.Hsapiens.dbSNP141.GRCh38'
I need to work with GRCh37 annotations.
Is there a trick to transform a 'SNPlocs' object, such as
Salut Frédéric,
As I said, this is available in the new versions of BSgenome
(1.36.2 in release, 1.37.3 in devel) which will propagate
to the public repos in a couple of hours. So make sure to
run biocLite() (with no arguments) in a couple of hours to
get any update that will become available
- Original Message -
From: Riccardo Romoli riccardo.rom...@unifi.it
To: bioc-devel@r-project.org
Sent: Thursday, July 2, 2015 2:55:41 AM
Subject: [Bioc-devel] Flagme creating vignettes ERROR
Hi, last night I received an automatic message regardless the flagme
package (I'm the
