Dear Bioconductor developers,
In the CAGEr package, I created a "CAGEexp" class that extends
"MultiAssayExperiment" without adding new slots, in order to define generic
functions that require CAGEr-specific contents in the colData slot.
Unfortunately, when run in the development branch of
Ok, Thank you very much.
Best,
Ti Tai
引述 "Shepherd, Lori" :
Your package does look clean for BiocInstaller/biocLite - looking
at the dependency I think this is coming from when your package is
Installed and from the dependency gage that has not been updated
yet. I think you can
Hi,
I just found based on user reports that the old version of my package
Logolas for R 3.4 and Bioc 3.6 is broken. It does install fine but the main
function does not run. Everything seems to be fine however for R 3.5 and
Bioc 3.7. I would like to produce either an error message if someone < R
Hi Nitesh,
After looking more closely, I went with option 1 that you clearly
outlined below. The cherry picked version of the history is now the
origin/master one at
https://github.com/jtleek/sva-devel/commits/master. From
http://bioconductor.org/developers/how-to/git/resolve-duplicate-commits/
Thank you Nitesh!
I'll talk to Jeff and Claire.
Best,
Leo
On Sat, Aug 25, 2018 at 2:00 AM Turaga, Nitesh
wrote:
>
> Hi Leo,
>
> I’ll try to help you with this issue.
>
> The duplicates commit you have on your package “sva” come from the pre-git
> era of Bioconductor. There are three ways we
Your package does look clean for BiocInstaller/biocLite - looking at the
dependency I think this is coming from when your package is Installed and from
the dependency gage that has not been updated yet. I think you can safely
ignore this warning and when gage is updated it should
Hi,
It's anamiR.
Best,
Ti Tai Wang
引述 "Shepherd, Lori" :
What is the name of your package?
It is possible it could be coming from one of the packages you
depend or import. If you are sure you replaced all the instances in
your package this could be the case.
Lori Shepherd
