Hi Mikhail -- would you provide the results of sessionInfo() after the
failure? Thanks
On Fri, Aug 7, 2020 at 7:08 PM Mikhail Dozmorov
wrote:
> Dear Bioconductor team,
>
> I am trying to update a package we developed, HiCcompare.
> https://bioconductor.org/packages/HiCcompare/. The package has
Dear Bioconductor team,
I am trying to update a package we developed, HiCcompare.
https://bioconductor.org/packages/HiCcompare/. The package has been
successfully submitted previously. However, now `R CMD check` throws an
error:
E> Quitting from lines 426-427 (HiCcompare-vignette.Rmd)
E> Error:
Thank you for the suggestions.
I will have a look to other shiny packages as you suggested. I think it is
a good idea to export also the functions used by the shiny App and make
possible to follow the pipeline also through command line. Nowadays my app
is very focus on the graphical side.
Best
Hi Herve,
The performance of seqlevelStyle when the genome of a GRanges object has been
set, still seems strange to me.
Here is some example code I ran in the Bioconductor:devel docker:
gr <- GRanges(rep(c("chr2", "chr3", "chrM"), 2), IRanges(1:6, 10))
genome(gr) <- "hg19"
seqlevelsStyle(gr) <-
