Re: [Bioc-devel] Including large files for the package

2023-09-06 Thread Mike Smith
> > not done every time). >> > >> > >> > >> > >> > >> > Lori Shepherd - Kern >> > >> > Bioconductor Core Team >> > >> > Roswell Park Comprehensive Cancer Center >> > >> > Depart

Re: [Bioc-devel] Including large files for the package

2023-09-05 Thread Mike Smith
Streets > > > > Buffalo, New York 14263 > > > > > > From: Bioc-devel on behalf of Vincent > > Carey > > Sent: Thursday, August 31, 2023 8:29 AM > > To: Martin Grigorov > > Cc: bioc-devel@r-project.

Re: [Bioc-devel] Including large files for the package

2023-08-31 Thread Ali Sajid Imami
14263 > > > From: Bioc-devel on behalf of Vincent > Carey > Sent: Thursday, August 31, 2023 8:29 AM > To: Martin Grigorov > Cc: bioc-devel@r-project.org > Subject: Re: [Bioc-devel] Including large files for the package >

Re: [Bioc-devel] Including large files for the package

2023-08-31 Thread Kern, Lori via Bioc-devel
Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Vincent Carey Sent: Thursday, August 31, 2023 8:29 AM To: Martin Grigorov Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] Includi

Re: [Bioc-devel] Including large files for the package

2023-08-31 Thread Vincent Carey
On Thu, Aug 31, 2023 at 7:28 AM Martin Grigorov wrote: > Hello, > > Perhaps you could use https://bioconductor.r-universe.dev/BiocFileCache to > download the big file on demand. > The benefit is that the file would be stored in ~/.cache/R/yourPackage/ > (for Linux; something similar for

Re: [Bioc-devel] Including large files for the package

2023-08-31 Thread Martin Grigorov
Hello, Perhaps you could use https://bioconductor.r-universe.dev/BiocFileCache to download the big file on demand. The benefit is that the file would be stored in ~/.cache/R/yourPackage/ (for Linux; something similar for Windows/Mac) and reused between sessions. Regards, Martin On Tue, Aug 29,