Dear Bioc Developer,
I would like to add another person as developer and maintainer of my package
IsoGeneGUI. Please let me know the procedure for that. Look forward to your
suggestion. Thank you.
Best regards,
Setia
___
Bioc-devel@r-project.org
Dear Setia
just edit the “DESCRIPTION” file.
For maintainers, note the CRAN Repository Policy at
http://cran.r-project.org/web/packages/policies.html which I think we generally
also apply in Bioconductor: The package’s DESCRIPTION file must show both the
name and email address of a single
Hi Setia,
you will probably also need an account with write permissions to the
package SVN for the new maintainer. For this its probably best to
contact Dan Tenenbaum dtene...@fhcrc.org
Cheers,
Andrzej
On Fri, Oct 3, 2014 at 11:48 AM, Wolfgang Huber whu...@embl.de wrote:
Dear Setia
just edit
Hello
Is it possible to use (RStudio's) rmarkdown package as a vignette
builder for the upcoming release?
ie, with the (at least locally working) configuration
DESCRIPTION
Suggests: knitr, rmarkdown, BiocStyle
VignetteBuilder: knitr
vignette/vignette.Rmd
---
title: ...
Hi Gordon,
Sean Davis has something about this on his blog:
http://watson.nci.nih.gov/~sdavis/blog/convert_from_sweave_to_r_markdown_vignettes/
Best,
Jim
On Fri, Oct 3, 2014 at 9:06 AM, Gordon Ball gordon.b...@ki.se wrote:
Hello
Is it possible to use (RStudio's) rmarkdown package as a
- Original Message -
From: Henrik Bengtsson h...@biostat.ucsf.edu
To: jmac...@u.washington.edu
Cc: bioc-devel@r-project.org
Sent: Friday, October 3, 2014 6:56:59 AM
Subject: Re: [Bioc-devel] RMarkdown for vignettes
I think it requires Bioc core to make a statement that pandoc
On Thu, 02-10-2014, at 22:42, Hervé Pagès hpa...@fhcrc.org wrote:
Hi,
This makes a lot of sense. I also find a bit disturbing that the main
text cannot immediately be distinguished from other things like captions
or page headers (BiocStyle places the title of the vignette at the top
of
Hi Gordon, James,
thank you for pointing this out! At the time BiocStyle for markdown
documents was developed 'rmarkdown' was not yet on CRAN and couldn't
be used as a vignette builder engine.
As things changed in the meantime, the approach described by Gordon
should be just fine. I will update
Added a new vignette to GenomicRanges that explains this stuff.
On Mon, Sep 29, 2014 at 6:54 PM, Michael Lawrence micha...@gene.com wrote:
I admit negligence in not document this. But if you look at VRanges, you
can see how we set a method for extraColumnSlotNames returns a character
vector
