Hi,
On Sat, 2017-10-14 at 14:04 -0400, Kasper Daniel Hansen wrote:
> I recognize that the code base is pretty complex (and that mass spec
> libraries are a mess at times), but could there be advantages to
> modularizing the code into more than 1 package, with a mzR master
> package. Could that
On 10/15/2017 06:00 PM, cstrato wrote:
I have just seen the update 2017-10-15 of the BUILD/CHECK report:
http://bioconductor.org/checkResults/devel/bioc-LATEST/xps/
which was not available when I have sent my former mail.
For some reason my commit to version xps_1.37.2 was not accepted.
I have just seen the update 2017-10-15 of the BUILD/CHECK report:
http://bioconductor.org/checkResults/devel/bioc-LATEST/xps/
which was not available when I have sent my former mail.
For some reason my commit to version xps_1.37.2 was not accepted.
Please tell me what I need to do to solve
Hi,
Since 'https://github.com/cstrato/xps' does only contain information how
to create or push a repository I tried to follow again:
http://master.bioconductor.org/developers/how-to/git/push-to-github-bioc/
2. View existing remotes
$ git remote -v
origin g...@github.com:cstrato/xps.git
Sorry, didn't see Martin's response before sending.
Valerie
On 10/15/2017 07:17 AM, Obenchain, Valerie wrote:
Hi,
You have a couple of options described on the ?news man page. The most common
is to have a NEWS plain text file at the same level as DESCRIPTION, NAMESPACE,
R etc. For examples,
Hi,
You have a couple of options described on the ?news man page. The most common
is to have a NEWS plain text file at the same level as DESCRIPTION, NAMESPACE,
R etc. For examples, you could look at a variety of Bioconductor packages,
GenomicRanges, IRanges, Rsamtools etc.
?news also
You can get the information through the merged tables:
> dbListTables(con)
[1] "gds" "gds_subset""geoConvert"
[4] "geodb_column_desc" "gpl" "gse"
[7] "gse_gpl" "gse_gsm" "gsm"
[10] "metaInfo" "sMatrix"
> cdesc =
library(GEOmetadb)
if(!file.exists('GEOmetadb.sqlite')) getSQLiteFile()
con <- dbConnect(SQLite(),'GEOmetadb.sqlite')
dbListFields(con,'gse')
## [1] "ID" "title"
## [3] "gse" "status"
## [5] "submission_date" "last_update_date"
## [7] "pubmed_id"
