Re: [Bioc-devel] Changes to rhdf5

Great work Mike; looking forward to it on BioC-devel. When are persistently open file handles generated? All the time, or on specific uses of the upper-case H5 functions? I ask because I recall that the HDF5 library permits multiple open file handles, but it throws an error if the access flags

Re: [Bioc-devel] mzR build failure on Windows: missing HDF5 libraries

Would be great, Steffen, to update mzR to use Rhdf5lib. I believe CRAN packages with mzR dependencies are also failing to build under devel, as well as xcms and other mzR dependencies in Bioc. Martin On 01/03/2018 04:18 AM, Mike Smith wrote: Rhdf5lib is in the release branch too. I'm happy

Re: [Bioc-devel] Updated Deprecated Package List for Bioc 3.7

Thank you for volunteering to take over maintenance of ToPASeq as the original maintainer has remained unresponsive Martin will assist in updating credentials to allow access. Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics &

Re: [Bioc-devel] EXTERNAL: Re: DOI for packages

Hi, Thanks for the package DOIs. I have a question about citation formats from these DOIs. When using the bioconductor DOIs to programatically pull a citation from DOI providers in bibtex format, the author field seems to be formatted incorrectly. I don't really know how the information is

Re: [Bioc-devel] RSS feed on bioconductor.org/developers/gitlog

Hi, The order of the commits, is when the maintainer “pushes” to our git server. Most recent commit is at the top. We increased the limit to 500. Best, Nitesh > On Jan 5, 2018, at 9:16 AM, Felix Ernst wrote: > > Hi Nitesh, > > Happy new year as well. > > I was

[Bioc-devel] Changes to rhdf5

Dear BioC Developers, Just a heads up to point out that I've made a fundamental change to the rhdf5 package over the last week. I've directly emailed developers of packages that I think this affects, but thought I would post here too in case I missed someone. These changes are mostly to make it