Hello !
I am receiving these messages.
We haven't changed anything in the package and all of a sudden we are
getting errors to the effect that the "vignette build failed" "because a
connect error"
I do not know what causes the error (Since we haven't changed anything in
the package) and how
Hi Jianhong,
We found that another software package has code in its examples that
is reinstalling org.Hs.eg.db, BSgenome.Hsapiens.UCSC.hg18, and
TxDb.Hsapiens.UCSC.hg18.knownGene. This causes problems in the context
of the nightly builds were many packages are checked simultaneously.
After a
Hi Paul,
After a long hunt, the software package causing these daily
reinstallations of BSgenome.Hsapiens.UCSC.hg38 has been
identified and his maintainer contacted.
Sorry for the inconvenience this has caused so far.
H.
On 6/24/19 12:31, Paul Shannon wrote:
> Warning in
Warning in .seqlengths_TwoBitFile(x) : mustOpen:
Can't open
/home/biocbuild/bbs-3.9-bioc/R/library/BSgenome.Hsapiens.UCSC.hg38/extdata/single_sequences.2bit
to read: No such file or directory
Timing stopped at: 0.176 0 0.175 Error in .seqlengths_TwoBitFile(x) : UCSC
library
Hi,
One of the users of our FlowSorted.CordBloodCombined.450k package contacted me
for advice about an issue during installation using either Bioconductor 3.9 and
3.10. The issue appears when trying to access the ExperimentHub and dealing
with a proxy. A similar error was previously reported
Hi,
The windows test machine is throwing up an error when compiling the PDF manual:
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
LaTeX errors found:
! Package textcomp Error: Symbol \textcurrency not provided by
(textcomp)font family ptm in TS1
