I had a similar issue in the past. It was during vignette builiding. I
fixed it by adding the argument “result=FALSE” in the r code.
On Mon, Sep 30, 2019 at 9:25 AM Alberto Valdeolivas
wrote:
> Dear Bioc-Team,
>
> I am submitting the following new package to Bioconductor:
>
>
Try BFG cleaner https://rtyley.github.io/bfg-repo-cleaner/
But I agree with what Herve says. You may use this on your own github repo if
you'd like. But leaving it as is, is a good option.
On 9/30/19, 10:57 PM, "Bioc-devel on behalf of Pages, Herve"
wrote:
Hi Jelena,
The
Hi Jelena,
The .Rproj.user/ folder and the .git/ folder are 2 different things. Not
sure exactly which one is causing you problem but they shouldn't.
The .Rproj.user/ folder is an RStudio thing that should not be added to
git so make sure it's listed in your .gitignore file.
The .git folder
Dear Bioc-Team,
I am submitting the following new package to Bioconductor:
https://github.com/Bioconductor/Contributions/issues/1263
R CMD check results in a TIMEOUT when running in Windows server, whereas it
runs much faster in Linux and MAC:
There is a separate Experiment data package pwrEWAS.data correct?
I think this is our mistake and it wasn't added to the experiment data package
manifest. We will correct on our end. The next Data Experiment package builds
will happen Tuesday so the software package will not clear up until
Hey Lori,
Yes, pwrEWAS.data is a separate ExperimentHub package to cache the data.
The package was originally submitted as pwrEWAS_data and subsequently changed
to pwrEWAS.data. Maybe that cause the error.
Thank you for looking into this.
Stefan
From: Shepherd, Lori
Sent: Monday, September
Dear all,
I have a WARNING, caused by the file larger than 5 MB:
From the file name,
.Rproj.user/4185876F/ctx/ctx-17050/environment
.git/objects/pack/pack-88dfd7e4c8ad695717e8d77594e9c340fabcc39f.pack
it looks like it’s an R project environment file which was out of gitignore at
some
Dear Bioc-Team,
A packages (pwrEWAS) I submitted caused an error in checkResults:
https://bioconductor.org/checkResults/3.10/bioc-LATEST/pwrEWAS/malbec1-install.html
ERROR: dependency 'pwrEWAS.data' is not available for package 'pwrEWAS'
The error was caused by failing to load the related
The deadline for commits to the current release 3.9 branch is Monday October
14th. At this time the release 3.9 branch will be frozen and no longer accept
any commits. If your package is having TIMEOUT, ERROR, or WARNINGS - it will
forever be frozen in this state. This is in preparation for the
