[Bioc-devel] Windows only vignette error - any ideas?

2019-12-03 Thread Christopher John
Hi Since this morning I am getting an error for the Windows build only of my M3C package, shown below. Could anyone help please? Thanks, Chris * checking for file 'M3C/DESCRIPTION' ... OK * preparing 'M3C': * checking DESCRIPTION meta-information ... OK * installing the package to build

Re: [Bioc-devel] What are the R CMD check settings (env vars) that Bioc uses?

2019-12-03 Thread Henrik Bengtsson
Thank you - sounds great. /Henrik On Tue, Dec 3, 2019 at 9:23 AM Pages, Herve wrote: > > Hi Henrik, > > On 12/3/19 09:13, Henrik Bengtsson wrote: > > I'm interested in finding out what customization Bioconductor servers > > do to R CMD check, e.g. _R_CHECK_***_ settings. I think someone > >

Re: [Bioc-devel] What are the R CMD check settings (env vars) that Bioc uses?

2019-12-03 Thread Pages, Herve
Hi Henrik, On 12/3/19 09:13, Henrik Bengtsson wrote: > I'm interested in finding out what customization Bioconductor servers > do to R CMD check, e.g. _R_CHECK_***_ settings. I think someone > pointed me to some location in the past, but I cannot locate it. The settings on the Linux/Mac

[Bioc-devel] What are the R CMD check settings (env vars) that Bioc uses?

2019-12-03 Thread Henrik Bengtsson
I'm interested in finding out what customization Bioconductor servers do to R CMD check, e.g. _R_CHECK_***_ settings. I think someone pointed me to some location in the past, but I cannot locate it. I think a natural place to document those would be on the 'Node Info' pages together with the

[Bioc-devel] BioC2020 - mark your calendars!

2019-12-03 Thread Levi Waldron
BioC2020 will be held Wed July 29 - Fri July 31 in Boston, at Simmons University and Harvard Medical School. The website is up at https://bioc2020.bioconductor.org and will be undergoing frequent updates. Stay tuned for the announcement of invited speakers, registration and accommodations, calls