Re: [Bioc-devel] New package Vignette

2020-08-21 Thread Tim Triche, Jr.
The vignette shows up when I visit Looks like a useful package. --t > On Aug 21, 2020, at 1:54 PM, Shepherd, Lori > wrote: > > Thank you for reaching out. Since the package just became available please > allow a few days for everything to populate on the builders and landing pages. > We

Re: [Bioc-devel] About rcellminerData and rcellminerData new versions

2020-08-21 Thread Elloumi, Fathi (NIH/NCI) [C] via Bioc-devel
Dear bioc-devel team, Looking at this link : https://bioconductor.org/developers/how-to/git/abandon-changes/ , it seems that the Bioconductor team can reset a previous commit. Please advise. Thanks, Fathi From: "Elloumi, Fathi (NIH/NCI) [C]" Date: Friday, August 21, 2020 at 1:32 PM To:

Re: [Bioc-devel] New package Vignette

2020-08-21 Thread Shepherd, Lori
Thank you for reaching out. Since the package just became available please allow a few days for everything to populate on the builders and landing pages. We will keep an eye on it and if it is still not appearing by next week our team will follow up with an investigation. Thank you Lori

Re: [Bioc-devel] About rcellminerData and rcellminerData new versions

2020-08-21 Thread Elloumi, Fathi (NIH/NCI) [C] via Bioc-devel
Hi Nitesh, In my local RELEASE_1_3, I plan to do the following: * Git rest –hard * Change the version number (add 1 to the current z) * Git Commit (locally) * Git push upstream RELEASE_3_11 Is this acceptable? Thanks, Fathi From: Nitesh Turaga Date: Friday, August 21, 2020

Re: [Bioc-devel] About rcellminerData and rcellminerData new versions

2020-08-21 Thread Nitesh Turaga
Hi, This is not ideal. We do not reset packages to previous versions. Please make the changes and “only” increment the version number in the “patch” version i.e x.y.z version number, update the “z”. Best, Nitesh > On Aug 21, 2020, at 12:47 PM, Elloumi, Fathi (NIH/NCI) [C] > wrote: > >

Re: [Bioc-devel] About rcellminerData and rcellminerData new versions

2020-08-21 Thread Elloumi, Fathi (NIH/NCI) [C] via Bioc-devel
Thanks Nitesh for you prompt response. Dear Bioconductor team, Could please help reset the two packages rcellminer and rcellminerData to a previous commit done on April the 27th (I think version 2.10.0). Thanks, Fathi From: Nitesh Turaga Date: Friday, August 21, 2020 at 12:39 PM To:

Re: [Bioc-devel] About rcellminerData and rcellminerData new versions

2020-08-21 Thread Nitesh Turaga
Hi, It is an enhancement. Only bug fixes should go into RELEASE_3_11. The devel branch is the “master” branch in git, there is no RELEASE_3_12 yet. We will create it in the next release. Push your changes to the “master” branch. Address your emails to bioc-devel@r-project.org

[Bioc-devel] New package Vignette

2020-08-21 Thread ELENI ADAM
Dear Bioconductor team, Our package (hummingbird) got accepted some days ago and yesterday the 'landing page' was created at: https://bioconductor.org/packages/hummingbird But unfortunately, there is no file under the "Documentation" section. The package has a vignette, but it is not appearing