[Bioc-devel] Vignette Building Latex Errors on Windows Release Branch
I am having trouble reproducing some vignette build errors for our PharmacoGx package on Windows (tokay2). The error is a Latex error: LaTeX Error: Environment cslreferences undefined. It seems likely to be due to a missing dependency for the style file we are using, however, I do not understand why it works on all other build machines. tokay1 does not have the same error, and is building the same vignette. Likewise, none of the other OS machines are missing this dependency. I also tried to reproduce in a newly reinstalled Windows environment. After installing R 4.0, Rtools, all the package dependencies, and: knitr, knitcitations, rmarkdown, pander, and tinytex, the package builds on the machine. As far as I can tell, all these packages are also installed on tokay2. Does tokay2 use a different Latex distribution from what is installed by tinytex ? -- Petr Smirnov psmirnov2...@gmail.com ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
[Bioc-devel] iGraph depending packages failing on Windows build machines
I noticed that our Bioconductor package (PharmacoGx) is failing to build on Windows development, with the error: error: DLL 'maps' not found: maybe not installed for this architecture? A google search brings up the package 'sincell', which has experienced this error before. The only dependency that package has is iGraph (CRAN), which we share with them. Checking some of the build reports, there's a handful of packages failing with the same issue. There is also at least one package, 'Mulcom', that is failing with the error: Error : package 'maps' is not installed for 'arch = i386' The CRAN package 'maps' seems to be the one providing the 'maps.dll' file. There seems to be a successful binary build of the 'maps' package on CRAN for both the release and prerelease versions of R. Is this is an issue with the package 'maps' not being successfully installed on the Windows build system? -- Petr Smirnov [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
