Re: [Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

2018-09-05 Thread Shepherd, Lori
Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect" Please note, there is no CITATION file anywhere in your repository! Verify this for yourself, if you like, by changing to a temporary location and making a new clo

Re: [Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

2018-09-05 Thread Xiangyu Luo
atics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* Bioc-devel on behalf of Martin > Morgan > *Sent:* Wednesday, September 5, 2018 7:37:54 AM > *To:* Xiangyu Luo > *Cc:* bioc-devel@r-project.org > *Subject:*

Re: [Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

2018-09-05 Thread Xiangyu Luo
Dear Martin, I greatly appreciate your super kind help! I will fix that very carefully. Thank you so much! Best regards with many thanks! Xiangyu On Wed, Sep 5, 2018 at 7:37 PM Martin Morgan wrote: > Please note, there is no CITATION file anywhere in your repository! > > Verify this for

Re: [Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

2018-09-05 Thread Martin Morgan
Please note, there is no CITATION file anywhere in your repository! Verify this for yourself, if you like, by changing to a temporary location and making a new clone of your package git clone g...@git.bioconductor.org:pacakges/BUScorrect You have not added it to your local repository, or

Re: [Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

2018-09-05 Thread Xiangyu Luo
Dear Martin, For version 0.9.9, I inserted a CITATION into the "inst", but it did not work. Therefore, in version 0.9.10, I took the CITATION file out of the "inst", but it still did not work. Thank you so much for your patience and guidance! Best regards, Xiangyu On Wed, Sep 5, 2018 at 6:20

Re: [Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

2018-09-05 Thread Xiangyu Luo
Dear Levi, Thanks a lot for your suggestion! I actually have bumped the version number. I am reading the link you shared to see whether I made mistakes somewhere. Best regards, Xiangyu On Tue, Sep 4, 2018 at 9:18 PM Levi Waldron wrote: > And don't forget to bump your version number, and to

Re: [Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

2018-09-05 Thread Martin Morgan
after I git clone g...@git.bioconductor.org:packages/BUScorrect This is the log that I see BUScorrect master$ git log --name-only -n 2 commit 5ccfa7ce4f665f3ffbc55b26a5cd81beaafd3293 Author: Xiangyu Luo Date: Fri Aug 31 19:10:32 2018 +0800 version bump DESCRIPTION commit

Re: [Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

2018-09-05 Thread Xiangyu Luo
Dear Martin, Thank you very much for the information! I have pushed my changes, bumped the version, and waited for a successful nightly build, but the citation result did not change. I am wondering whether the CITATION file should be in "inst" folder? Best, Xiangyu On Tue, Sep 4, 2018 at

Re: [Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

2018-09-04 Thread Levi Waldron
And don't forget to bump your version number, and to check that the new version number is reflected at the bioc-devel landing page. You will have to do a separate commit to the release branch if you want to add the citation to release before the next release cycle (I assume this is an allowable

Re: [Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

2018-09-04 Thread Martin Morgan
Have you pushed your changes to g...@git.bioconductor.org:packages/BUScorrect and waited for a successful nightly build http://bioconductor.org/checkResults/devel/bioc-LATEST/BUScorrect/ ? On 09/03/2018 07:10 AM, Xiangyu Luo wrote: Dear All, The citation information of my "BUScorrect" R

[Bioc-devel] Change the citation of my Bioconductor R package "BUScorrect"

2018-09-03 Thread Xiangyu Luo
Dear All, The citation information of my "BUScorrect" R package is shown as an R package version (e.g., xxx, xxx, R package version 0.99.10.), but I want it to be my original paper (e.g., xxx, xxx, JournalName). I tried to manually insert the "CITATION" file in the "inst" folder, as described in