Re: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel?

Fantastic - thankyou Herve! Aditya From: Hervé Pagès [hpa...@fredhutch.org] Sent: Tuesday, July 07, 2020 11:55 AM To: Bhagwat, Aditya; bioc-devel@r-project.org Subject: Re: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel? On 7/7/20 02

Re: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel?

om: Hervé Pagès [hpa...@fredhutch.org] Sent: Tuesday, July 07, 2020 11:45 AM To: Bhagwat, Aditya; bioc-devel@r-project.org Subject: Re: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel? Hi Aditya, This change was not intended, sorry. Should be fixed in BSgenome 1.57.4. Cheers,

Re: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel?

[hpa...@fredhutch.org] Sent: Tuesday, July 07, 2020 11:45 AM To: Bhagwat, Aditya; bioc-devel@r-project.org Subject: Re: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel? Hi Aditya, This change was not intended, sorry. Should be fixed in BSgenome 1.57.4. Cheers, H. On 7/7/20 01

Re: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel?

] bsGenomeName(BSgenomeObject) disappeared in bioc-devel? Hi Aditya, This change was not intended, sorry. Should be fixed in BSgenome 1.57.4. Cheers, H. On 7/7/20 01:53, Bhagwat, Aditya wrote: > Sorry, my earlier email had a copy/paste error - corrected

Re: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel?

] on behalf of Bhagwat, Aditya [aditya.bhag...@mpi-bn.mpg.de] Sent: Tuesday, July 07, 2020 10:50 AM To: bioc-devel@r-project.org Subject: Re: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel? It's the BSgenome to GenomeDescription coercer that seems to be missing

Re: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel?

: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel? It's the BSgenome to GenomeDescription coercer that seems to be missing - is this on purpose? # bsgenomeName(BSgenomeObj) FAILS #--- bsname <- GenomeInfoDb::bsgenomeName(bsgen

Re: [Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel?

ult for coercing "BSgenome" to "GenomeDescription" Aditya From: Bioc-devel [bioc-devel-boun...@r-project.org] on behalf of Bhagwat, Aditya [aditya.bhag...@mpi-bn.mpg.de] Sent: Tuesday, July 07, 2020 10:22 AM To: bioc-devel@r-project.org Sub

[Bioc-devel] bsGenomeName(BSgenomeObject) disappeared in bioc-devel?

Dear bioc-devel, multicrispr is having an error on the bioc-devel build machines, caused by: unable to find an inherited method for function 'bsgenomeName' for signature '"BSgenome" This is a bit