On 5 Jan 2006, at 10:07, Jolyon Holdstock wrote:
Hi
I ran cvs update -Pd and then repeated the Ant command.
I can see it has updated as I'm trying to compile an extra source file
[javac] Compiling 1280 source files
But the build fails with the same error.
Is there a work around I could use
EMAIL PROTECTED] [mailto:[EMAIL PROTECTED]
Sent: 06 January 2006 01:11
To: Jolyon Holdstock
Cc: [email protected]; [EMAIL PROTECTED]
Subject: RE: [Biojava-l] Embl parser problem[Scanned]
There should only be one copy of the ProjectedFeatureHolder
(org.biojava.bio.seq.projection.ProjectedFeat
TECTED]>
Sent by: [EMAIL PROTECTED]
01/05/2006 06:07 PM
To: Mark Schreiber/GP/[EMAIL PROTECTED]
cc: [EMAIL PROTECTED], [email protected]
Subject: RE: [Biojava-l] Embl parser problem[Scanned]
Hi
I ran cvs update -Pd and then repeated the Ant comman
ssage-
From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED]
Sent: 05 January 2006 01:22
To: Jolyon Holdstock
Cc: [email protected]; [EMAIL PROTECTED]
Subject: RE: [Biojava-l] Embl parser problem[Scanned]
Hi -
When you do the CVS update or checkout make sure you use the -Pd
options.
The -d option p
L PROTECTED]>
cc: (bcc: Mark Schreiber/GP/Novartis)
Subject: RE: [Biojava-l] Embl parser problem[Scanned]
Thanks for the help.
I have downloaded the dev version and tried to build it.
I have no experience with Ant (I'm running v1.6.1) and the build fails.
The output fro
olyon Holdstock
Cc: [email protected]; [EMAIL PROTECTED]
Subject: Re: [Biojava-l] Embl parser problem[Scanned]
Hi -
A BioException would be expected when parsing an embl file via the
genbank
option. I is surprising you don't get one when parsing a genbank file
via
the embl option a
cc: Mark Schreiber/GP/Novartis)
Subject: [Biojava-l] Embl parser problem
Hi,
I have an application using BioJava1.4pre1.4 that loads an embl or
genbank file.
If I load an embl file via the genbank option a BioException error is
thrown.
But if I load a genbank file v
Hi,
I have an application using BioJava1.4pre1.4 that loads an embl or
genbank file.
If I load an embl file via the genbank option a BioException error is
thrown.
But if I load a genbank file via the embl option no BioException is
thrown and the sequence is created although it is not co
Hello
I'm using biojava to parse an EMBL Flat file, modify it, and dump it out
to file at the end. However when I used SeqIOTools.writeEmbl the file
created, did not have correctly ordered and nested RN, RP, RX, RA, RT
and RL lines. These lines should occur in repeated sets, one set for
each r
