Re: [Biojava-l] Error in AlphabetManager.xml

2001-12-19 Thread Thomas Down
On Wed, Dec 19, 2001 at 10:56:51AM -0500, Simon Foote wrote: > There's an error in the AlphabetManager.xml file which will causes the > parsing of Genbank DNA containing the ambiguity symbol "m" to fail. > > The cause is the ambiguity symbol "k" which is mis-identified. It should > read as foll

[Biojava-l] Error in AlphabetManager.xml

2001-12-19 Thread Simon Foote
There's an error in the AlphabetManager.xml file which will causes the parsing of Genbank DNA containing the ambiguity symbol "m" to fail. The cause is the ambiguity symbol "k" which is mis-identified. It should read as follows and not as "cytosine adenine". Ch