Re: [Biojava-l] Regexp matching performance

2001-05-16 Thread Michael B. Allen
On Wed, May 16, 2001 at 03:47:01PM -0400, Sharon L. Cousins wrote: > > I have rewritten our Python implementation of sequence record parsers and > filters (for both Genbank and EMBL format ) in Java and have narrowed down poor > performance problems to regular expression matching. If you're lo

[Biojava-l] Regexp matching performance

2001-05-16 Thread Sharon L. Cousins
Hello! Was wondering if any of you could comment on the performance of the Gnu or Oro (or any other) Regexp packages for Java. I have rewritten our Python implementation of sequence record parsers and filters (for both Genbank and EMBL format ) in Java and have narrowed down poor performance