RE: [Biojava-l] Multiple questions

2005-11-29 Thread Richard HOLLAND
ssage- > From: [EMAIL PROTECTED] > [mailto:[EMAIL PROTECTED] On Behalf Of Ola Spjuth > Sent: Tuesday, November 29, 2005 9:55 PM > To: Kalle Näslund > Cc: biojava-l@biojava.org > Subject: Re: [Biojava-l] Multiple questions > > > Thanks for all the comments, it should g

Re: [Biojava-l] Multiple questions

2005-11-29 Thread mark . schreiber
Kalle Näslund <[EMAIL PROTECTED]> Sent by: [EMAIL PROTECTED] 11/29/2005 09:34 PM To: Ola Spjuth <[EMAIL PROTECTED]> cc: biojava-l@biojava.org, (bcc: Mark Schreiber/GP/Novartis) Subject: Re: [Biojava-l] Multiple questions Ola Spjuth wrote:

Re: [Biojava-l] Multiple questions

2005-11-29 Thread Ola Spjuth
Thanks for all the comments, it should get me started. I do not intend to write a file-format guesser (out of my scope) but I would like to make an RFE for it here and now. I think many people would benefit from it. Cheers, .../Ola On Tue, 2005-11-29 at 14:34, Kalle Näslund wrote: > Ola Spju

Re: [Biojava-l] Multiple questions

2005-11-29 Thread Kalle Näslund
Ola Spjuth wrote: Hi, I am investigating the usefulness of BioJava as a backend for sequence management in Bioclipse (www.bioclipse.net). As a total newbie to Biojava, I have read the tutorial, BIA examples, glanced at the API, read my first FASTA-sequence and have come up with a few questions:

RE: [Biojava-l] Multiple questions

2005-11-28 Thread Richard HOLLAND
Hello Ola, > 1) Is it possible to search the Biojava-l archives without having to > manually browse by month? Not that I know of. Google is a pretty good alternative as it has indexed all the archive - just add +"biojava-l" to the beginning of your query. > 2) Is there a wrapper for SequenceIO.

Re: [Biojava-l] Multiple questions

2005-11-28 Thread mark . schreiber
>I am investigating the usefulness of BioJava as a backend for sequence >management in Bioclipse (www.bioclipse.net). As a total newbie to >Biojava, I have read the tutorial, BIA examples, glanced at the API, >read my first FASTA-sequence and have come up with a few questions: > >1) Is it possible