[caret-users] Question regarding plotting ROIs and connections between them on surface

2012-03-12 Thread SURIL GOHEL yahoo
Hi Experts, I am learning to start using caret for displaying results from one analysis. I have set of ROIs defined using Harvard-oxford atlas available through FSL and i performed connectivity analysis between these ROI -pairs. After statistics i have group difference where ROI-pairs show

Re: [caret-users] Question regarding plotting ROIs and connections between them on surface

2012-03-12 Thread Donna Dierker
Regarding the connections, this is something we're working on, and I don't think we have anything ready for public release. If you have something in volumetric form, you could display it, and you could view surface and volume together, varying the opacity, but I suspect you have something else

Re: [caret-users] ima images

2012-03-12 Thread Maestri, Matthew
Hi Tim, I was unable to use AFNI's to3d. Is there any way I can convert them in Caret or compile them somehow? What is a FSL in Caret? Thank you, Matthew From: caret-users-boun...@brainvis.wustl.edu [caret-users-boun...@brainvis.wustl.edu] on behalf of

Re: [caret-users] ima images

2012-03-12 Thread Timothy Coalson
FSL is another software package for viewing and manipulating MRI images, etc, which is entirely separate from Caret: http://www.fmrib.ox.ac.uk/fsl/ to3d's help suggests that it should understand .ima, but it doesn't seem to give much detail on how to use it: * Siemens .ima image files can now be

[caret-users] Fwd: ima images

2012-03-12 Thread Timothy Coalson
The list isn't liking donna's home email for some reason, forwarding her message at her request. Tim Begin forwarded message: *From: *caret-users-ow...@brainvis.wustl.edu *Subject: **Re: [caret-users] ima images* *Date: *March 12, 2012 6:14:03 PM CDT *To: *donna.dier...@gmail.com You are not