Re: [caret-users] talairached data

2003-10-21 Thread David Van Essen
The answer to the question is yes. Use the Map fMRI to Surface option in Caret, as described on p. 36 of Tutorial 1, to generate metric files for the human colin left and/or right hemispheres (plus the cerebellum if it is of interest). DVE On Tuesday, October 21, 2003, at 04:40 PM, Mark A. P

[caret-users] talairached data

2003-10-21 Thread Mark A. Pinsk
This is a question from a colleague doing human fMRI and thinking of using Caret: I have complete an fMRI analysis in AFNI, where my resulting statistical map is from a group analysis of 12 subjects. Each subject's data was placed in Talairach space prior to the group analysis. How can I pai

Re: [caret-users] Linux-to-Mac metric file problem

2003-10-21 Thread John Harwell
On Monday, October 20, 2003, at 07:23 PM, Mark A. Pinsk wrote: We just created a metric file of fMRI data with map_fmri_to_surface on my linux box, and ftp-ed the file to another linux box and a Mac OSX. There was no problem opening the file in caret on the linux box, however we got an er

Re: [caret-users] Linux-to-Mac metric file problem

2003-10-21 Thread johannes
Hi Mark, Mac OSX, like Windows, uses different line termination characters than linux. Since I don't have a Mac with OSX, I don't know if caret handles these correctly, and you might try converting them, e.g. find . -name "*.metric" | xargs perl -pi 's/\n/\r/' Remember to save a backup of your metr