Re: [caret-users] tailarach coordinate

2006-12-07 Thread Donna Dierker
Hi Mateus, Your question throws me a little bit, but I'll try to provide a helpful answer. When you register your surface to PALS_B12.LR, one of the resulting files in the atlas target directory is a file named like "def*Fiducial*coord" -- what David calls the "resampled" fiducial. (He doe

[caret-users] tailarach coordinate

2006-12-07 Thread Mateus Joffily
Hi, I have registred one individual surface into PALS-B12 (using Human.PALS_B12.LR.REGISTER-with-INDIVIDUAL.73730.spec). I would like to know the talairach coordinate of a voxel in the registered surface. Is it possible? Thanks for your help, Mateus

Re: [caret-users] segmentation fails w/ uniformized data

2006-12-07 Thread Donna Dierker
Hi Rebecca, As John said, uploading your volume is the quickest way for us to help, but here are some additional thoughts/factors: * For very non-uniform volumes, 3dUniformize may not be enough. You might need a bigger gun like FSL's FAST (http://www.fmrib.ox.ac.uk/fsl/fast/index.html), whic