> Rouhi
>
> Best Regards
> Rouhollah Abdollahi
>
> *Institut für Neurowissenschaften und Medizin (INM-3)*
> Forschungszentrum Jülich
> Leo-Brandt-Straße
> 52425 Jülich, GermanyTel: +49 2461 61-9324
>
>
>
> On Mon, Nov 14, 2016 at 4:33 PM, HINDRIKS, RIKKERT <
&g
izin (INM-3)*
> Forschungszentrum Jülich
> Leo-Brandt-Straße
> 52425 Jülich, GermanyTel: +49 2461 61-9324
>
>
>
> On Mon, Nov 14, 2016 at 11:28 AM, HINDRIKS, RIKKERT <
> rikkert.hindr...@upf.edu> wrote:
>
>> Hi all,
>>
>> Is it possible to load a .bo
Hi all,
Is it possible to load a .border file into Matlab? I am conducting my
analysis in Matlab and would like to use the border file of different
cortical parcellations
for visualization. And generally, what kind of structure does a border file
have?
Thanks and kind regards,
Rikkert Hindrik
___
e!
Kind regards,
Rikkert
P.S. I noticed that in the Paxinos atlas, V5 is merged with the medial
wall.
On Thu, Jan 8, 2015 at 3:51 PM, Donna Dierker
wrote:
> On Jan 7, 2015, at 10:16 AM, "HINDRIKS, RIKKERT"
> wrote:
>
> >
> > Hi Donna,
> >
> > I now h
hose meaning I don't understand as well. Could you please
clearify this for me and tell me
how to get a ROI-number for each vertex?
Much appreciated!
Kind regards,
Rikkert
On Wed, Nov 5, 2014 at 3:20 PM, Donna Dierker
wrote:
> On Nov 5, 2014, at 7:05 AM, "HINDRIKS, RIKK
t; source or target mesh, after it computes the registration.
>
> If it's not too hard, give it a shot and let us know how it goes.
>
>
> On Nov 4, 2014, at 12:59 PM, "HINDRIKS, RIKKERT"
> wrote:
>
> > Hi Donna,
> >
> > Thanks for the link
ter it computes the registration.
>
> If it's not too hard, give it a shot and let us know how it goes.
>
>
> On Nov 4, 2014, at 12:59 PM, "HINDRIKS, RIKKERT"
> wrote:
>
> > Hi Donna,
> >
> > Thanks for the link.
> >
> > Yes, I can imagine
still use Caret, but just making sure you know there are
> alternatives.
>
>
> On Nov 4, 2014, at 5:23 AM, "HINDRIKS, RIKKERT"
> wrote:
>
> > Hi Donna,
> >
> > To get a feeling for the registration process in Caret, I start with
> performing a sphe
some
files missing or do I do something wrong?
Thanks and kind regards,
Rikkert
On Fri, Oct 31, 2014 at 4:27 PM, Donna Dierker
wrote:
> On Oct 30, 2014, at 11:29 AM, "HINDRIKS, RIKKERT" <
> rikkert.hindr...@upf.edu> wrote:
>
> > Dear Donna,
> >
> > Tha
do not necessarily need the atlas I have now; I just need white-matter
tracts in register with an atlas)
Thank again,
Rikkert
On Fri, Oct 31, 2014 at 4:27 PM, Donna Dierker
wrote:
> On Oct 30, 2014, at 11:29 AM, "HINDRIKS, RIKKERT" <
> rikkert.hindr...@upf.edu> w
n Oct 29, 2014, at 10:56 AM, "HINDRIKS, RIKKERT" <
> rikkert.hindr...@upf.edu> wrote:
>
> >
> > Dear all,
> >
> > I have an averaged T1-image and co-registered volumetric atlas of the
> macaque brain (which has been digitized by a collaborato
Dear all,
I have an averaged T1-image and co-registered volumetric atlas of the
macaque brain (which has been digitized by a collaborator) and want to
derive from it a surface-based
atlas. Subsequently, I would like to use this atlas to get a parcellation
of the cortical surface of an individual m
volumes.
>
> It should also be noted that ~50% of your voxels are NaN, which are
> generally quite unfriendly to computation such as smoothing.
>
> Tim
>
>
>
> On Thu, Jun 19, 2014 at 2:41 PM, HINDRIKS, RIKKERT <
> rikkert.hindr...@upf.edu> wrote:
>
>> H
t;
> On Jun 19, 2014, at 1:12 AM, "HINDRIKS, RIKKERT"
> wrote:
>
> > Hi Donna,
> >
> > I tried to upload the file but am not sure if it worked though.
> > Please let me know...
> >
> > Kind regards,
> > Rikkert
> >
> >
>
a normal T1w image.
>
> If you see solid white, then please upload the volume here, so we can try
> to replicate the problem:
>
> http://pulvinar.wustl.edu/cgi-bin/upload.cgi
>
> Donna
>
>
> On Jun 18, 2014, at 12:32 PM, "HINDRIKS, RIKKERT" <
> rikkert.hindr.
Dear all,
When I load a T1-weighted scan into Caret, the image looks like a mask,
that is, all white voxels covering the brain. The voxel intensities
themselves are, however, nicely distributed and the grey and white matter
peaks are clearly visible. Also, the intensities are normalized between 0
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