[caret-users] Map SPM volume

2007-03-07 Thread Julianm Macoveanu
Hi guys, I need some help with basic stuff. I just want to use Caret to visualize my SPM2 activations on inflated/Fiducial surfaces. So I have the normalized volume file to start with. I have opened a spec file from the Caret tutorial, use the map volume to surface function, choose my volume,

Re: [caret-users] Map SPM volume

2007-03-07 Thread Donna Dierker
Hi Julian, When mapping to atlas, are you selecting a spec file created from this dataset: CARET_TUTORIAL_SEPT-06 http://sumsdb.wustl.edu/sums/directory.do?id=6585200 ... using steps as described in Section 5.1 of this tutorial: Caret_Tutorial_Oct06.pdf http://sumsdb.wustl.edu/sums/archiveli

RE: [BULK] Re: [caret-users] Map SPM volume

2007-03-07 Thread Julianm Macoveanu
Yes, I use the CARET_TUTORIAL_SEPT06/MAPPNING_PROCEDURES files, and load the Human.PALS_B12.BOTH.TEMPLATE-for-fMRI-MAPPING.73730.spec file. I think I got the hang of it. The break through was, after creating the metric file load one of the predefined scenes before trying to open my metric file. In

Re: [caret-users] Map SPM volume

2007-03-07 Thread Donna Dierker
On 03/07/2007 10:27 AM, Julianm Macoveanu wrote: Yes, I use the CARET_TUTORIAL_SEPT06/MAPPNING_PROCEDURES files, and load the Human.PALS_B12.BOTH.TEMPLATE-for-fMRI-MAPPING.73730.spec file. I think I got the hang of it. The break through was, after creating the metric file load one of the predefi

Re: [BULK] Re: [caret-users] Map SPM volume

2007-03-07 Thread julianm
Thanks Donna, everything seems to work now, so I’m happy :) About the surfaces, I saw something in the archive, is it a white brain, or deflated pial: http://sumsdb.wustl.edu:8081/sums/search.do?category_id=6 and then click the first option with a brain icon on it that is possible to view in the w