[ccp4bb] principle beamline scientist for SAXS/BioSAXS beamline at Diamond -Closingdate 6th October 2013

2013-09-11 Thread Martin Walsh
Dear all B21 is a tuneable bending magnet beamline dedicated to small angle X-ray scattering (SAXS) which will come online in 2014 at Diamond. There is now an exciting opportunity to take the scientific and operation lead of the beamline. As there is an increased need for SAXS in the biological

[ccp4bb] Fluidigm TOPAZ system looking for new home

2013-09-11 Thread Chris Richardson
We have a Fluidigm TOPAZ free interface diffusion crystallisation system that we no longer use. If it can't find a new home it will be disposed of. We're offering it free of charge to any interested UK organisation on the condition that the recipient pays for its transport. It's currently in

[ccp4bb] FW: Departmental License for Pymol

2013-09-11 Thread Phoebe A. Rice
This may get us a more advanced version than the one embedded in phenix? From: Erin Adams [ejad...@uchicago.edu] Sent: Wednesday, September 11, 2013 9:32 AM To: Shohei Koide; Herbert C Friedmann; Andrzej Joachimiak; Godfrey Getz; James Shapiro; Ronald S. Rock;

[ccp4bb] Please Delete: FW: Departmental License for Pymol

2013-09-11 Thread Phoebe A. Rice
MANY APOLOGIES the wrong address got auto-filled when I tried to forward this to my lab. Please delete. ++ Phoebe A. Rice Dept. of Biochemistry Molecular Biology The University of Chicago 773 834 1723; pr...@uchicago.edumailto:pr...@uchicago.edu

[ccp4bb] Research Assistant Position in Structural Biology of Macromolecular Complexes

2013-09-11 Thread Sebastian Klinge
*Research Assistant Position in Structural Biology of Macromolecular Complexes* The Rockefeller University, a premier biomedical research institute, seeks a Research Assistant to join our Laboratory of Protein and Nucleic Acid Chemistry. The successful applicant will be part of a creative

Re: [ccp4bb] Please Delete: FW: Departmental License for Pymol

2013-09-11 Thread Jason Vertrees
Hi Phoebe, We all accidentally mis-forward an email at one time or another, so no worries. Schrödinger has reissued new credentials to your department. Cheers, -- Jason On Wed, Sep 11, 2013 at 9:54 AM, Phoebe A. Rice pr...@uchicago.edu wrote: MANY APOLOGIES the wrong address got auto-filled

Re: [ccp4bb] MRBUMP - PHASER ?

2013-09-11 Thread Ronan Keegan
Hi Douglas, Have you applied all of the automatic updates to your installed version of CCP4? There was a bug relating to this that I fixed at one point and it was pushed out using our update system. However, if you've installed from source code you won't have this option. Best wishes,

[ccp4bb] Win-coot: replace residue

2013-09-11 Thread Uma Ratu
Hello, I try to replace one of cysteine residue to CSX using Win-coot. Here is how I did: Extensions Modelling Replace Residue... and enter the three letter code. The program place the CSX residue, but with break bond. The new residue is no longer linked with other residue and not in the

Re: [ccp4bb] Win-coot: replace residue

2013-09-11 Thread Bernhard Lechtenberg
Hi Uma, when I do the same procedure (in OSX, but the problem seems to be the same), the new residue is stored in a new chain with residue number 1. So you would need to renumber the residue and change the chain ID back to the original chain ID. It's annoyingly complicated, but it works for

Re: [ccp4bb] Win-coot: replace residue

2013-09-11 Thread Uma Ratu
Hi, Bernhard and Yury: I did change Cys to CSX or CSO with older version of Coot. And the program replace the residue inner the chain. With present Coot-0.7, it seems to be complicated to replace a residue. Thank you for your suggestions. Uma On Wed, Sep 11, 2013 at 4:40 PM, Bernhard

Re: [ccp4bb] Win-coot: replace residue

2013-09-11 Thread Paul Emsley
On 11/09/13 22:03, Uma Ratu wrote: Hi, Bernhard and Yury: I did change Cys to CSX or CSO with older version of Coot. And the program replace the residue inner the chain. With present Coot-0.7, it seems to be complicated to replace a residue. Thank you for your suggestions. Uma On Wed, Sep