[ccp4bb] bbc4 radio

2014-10-07 Thread Rosario Recacha
Hello, Today there are two interesting programs at BBC radio. 1st At 9:00 UK time, Jim Alkhalili talks with Elsepth Garman http://www.bbc.co.uk/programmes/b04kbjhg 2nd. About the letters of Dorothy Hodgkin at 13:45 UK time http://www.bbc.co.uk/programmes/b04lc3gt Enjoy it! Kind

[ccp4bb] Adxv user manual and support for hdf5

2014-10-07 Thread Andrew Arvai
A new and improved user manual is now available for Adxv: http://www.scripps.edu/~arvai/adxv/AdxvUserManual.pdf There is also a beta version of Adxv which now supports hdf5: http://www.scripps.edu/~arvai/adxv.html#DownloadBeta Andy

Re: [ccp4bb] Molecular Replacement model preparation

2014-10-07 Thread Sheriff, Steven
All: While Phil Jeffrey attributed to me the trick of aligning the hinge axis of an Fab along the Z direction, I, in turn, must give credit to Mirek Cygler, who explained this to me at the Diffraction Methods in Molecular Biology [now Structural Biology] Gordon Research Conference in 1986.

Re: [ccp4bb] Molecular Replacement model preparation

2014-10-07 Thread Scott Thomas Walsh
Hi Steven, Thank you for the information and guidance. When you search for all the ensembles with Phaser do you use “AND” or “OR” searching? Cheers, Scott While Phil Jeffrey attributed to me the “trick” of aligning the hinge axis of an Fab along the Z direction, I, in turn, must give

[ccp4bb] Industrial Protein crystallographer post available

2014-10-07 Thread McEwan, Paul
Dear CCP4bb members, We have an exciting opportunity for somebody to become a member of our expanding structural biology unit to support development of new drugs, biopharmaceuticals and biotechnologies. Please only apply via the careers page on our website www.evotec.comhttp://www.evotec.com

Re: [ccp4bb] How to rename nucleic acid residues in PDB files

2014-10-07 Thread William G. Scott
CCP4 has a number of such utilities, such as pdbset. http://www.ccp4.ac.uk/html/pdbset.html You can find others by looking here: http://www.ccp4.ac.uk/html/FUNCTION.html HTH, William G. Scott http://scottlab.ucsc.edu/~wgscott On Oct 7, 2014, at 11:01 AM, Sasha Pausch

Re: [ccp4bb] Molecular Replacement model preparation

2014-10-07 Thread Randy Read
Dear Scott, By “AND” searching, presumably you mean adding another SEARCH command? (Or clicking “Add another search” in the ccp4i interface.) For Steven’s strategy, you want to specify separate searches for separate ensembles, i.e. give several SEARCH commands in a script or add extra