Dear all,
There is not much by way of published literature on this. Are there
unpublished methods that people have used and have found to work reliably ?
Any help will be very much appreciated.
Warm regards,
Anirban
>>>These simple things are easily forgotten if there isn't direct visual
>>>evidence for their existence.
Maybe someday we scientists will collectively realize the huge importance of
intuitive data presentation and focus more on it, scorn it less as "mere
presentation"? When one thinks of the m
Dear Jeffrey,
Thank you for sharing your observations and the questions they
bring up.
I can see two things in the 3D displays for your two PDB entries,
none of which seems new or surprising.
The first is that there is a peppering of blue dots within the
volume that otherwise seem
Hi Gerard,
Very nice server indeed. I reviewed the 3D plots of some recent high res
structures and am struck by the granularity which is not necessarily globally
directional. For instance, I ran 4QRN and 5EHI and see "ripples" in the I/sigI
plot between the various "layers" (higher res yellow t
Critical Assessment of Techniques for Protein Structure Prediction (CASP)
community experiments aim to advance the state of the art in protein structure
modeling. Every other year since 1994, CASP collects information on soon-to-be
released experimental structures, passes on sequence data to the
>> I am not sure that there is any such thing as an up-to-date estimate of
>> the prevalence of anisotropy in the PDB - but now you can get a feel for it
>> yourself by looking at any entries you want. However please do not submit
>> the whole PDB to the server - yet ;-) .
It would be great
Dear Jacob,
Thank you for the appreciative comment.
I am not sure that there is any such thing as an up-to-date
estimate of the prevalence of anisotropy in the PDB - but now you can
get a feel for it yourself by looking at any entries you want. However
please do not submit the whol
Wow, this is really cool--just tried a quick look at a recent membrane protein
(5eqi) and you can see right away that there is anisotropy.
I would guess this can be found in the literature, but how prevalent is
anisotropy in the PDB?
Jacob Keller
+++
Dear all,
Ever since the WebGL viewer became available on the STARANISO
server, we have found ourselves using it with increasing frequency to
take a quick look (a "peep") at the diffraction data deposited with
various PDB entries - for example, to try and identify a root cause
for some sub-op
Dear all,
We have a position open for a PhD student in the field of structural biology
and drug discovery. The project focuses on structure and inhibition of
ADP-ribosyltransferases. Information on our team and projects can be found from
our web pages: http://www.oulu.fi/biocenter/groups/lehti
Dear colleagues,
I am currently looking for a PhD student to join our research team at
University of Montpellier (South of France) between September and
December 2018. The PhD work will focus on the structural
characterization of receptor-ligand complexes involved in inflammation
during cance
Dear all
We currently have three vacancies to lead and develop three of our structural
biology beamlines here at Diamond Light Source.
Two MX beamlines:
the in-situ serial crystallography beamline VMXi
(http://www.diamond.ac.uk/Beamlines/Mx/VMXi.html):
VMXi – http://www.diamond.ac.uk/Career
Dear all,
We have an opening for a beamline scientist at I24. I24 offers cryo, RT, in
situ, and serial crystallography of microcrystals and this is an exciting
opportunity to be at the cutting edge of microfocus and serial MX at Diamond.
For more information and details on how to apply etc see
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