Re: [ccp4bb] cell discrepancies and stuck refinement using different XDS-versions

2018-08-07 Thread Keller, Jacob
>>But there is no rule without exception, Well, occasionally there is. JPK To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB=1

Re: [ccp4bb] cell discrepancies and stuck refinement using different XDS-versions

2018-08-07 Thread Kay Diederichs
Dear all, I post this again to CCP4BB because some people informed me that they received an empty email from me. This time I use my email client; previously I used the Jiscmail web interface - does anybody know what went wrong? Hopefully it works this time. Sorry if you get this twice. Kay

[ccp4bb] Postdoc position in structural biology

2018-08-07 Thread Davis, Jamaine
Postdoctoral position investigating the impact of genetic variations on three-dimensional structure/function of proteins available in the laboratory of Jamaine Davis at Meharry Medical College in Nashville, TN There is an immediate availability in the laboratory of Jamaine Davis for an

Re: [ccp4bb] tCNS and space group determination

2018-08-07 Thread Randy Read
Dear Marcelo, First I would look at the data to see if you have ice rings, because the peak in mean intensity and second moment of the intensity at about 2.25A resolution suggests an ice ring problem. If so, you should make sure you don't contaminate the data with spurious large intensities.

[ccp4bb] Help PDBe to enrich structure data with functional annotations

2018-08-07 Thread Mihaly Varadi
Dear All, We would be grateful if you could spend a moment of your time filling out this short survey on PDBe-KB [https://goo.gl/forms/6jcmDZNXIQm6IZFj2], to help us understand what types of additional structure annotations would be useful to you. PDBe-KB (Protein Data Bank in Europe -

[ccp4bb] PhD position in structural biology available at University of Essex, UK

2018-08-07 Thread Prischi, Filippo
Ph. D. Student Position “Flipping the switch; AtS6K2 signalling during stress” A 3-year Leverhulme Trust funded PhD studentship is available, starting from February 2019, to work in the laboratory of Dr Filippo Prischi (University of Essex, UK) and Dr Marta Carroni (SciLife laboratories,

[ccp4bb] Postdoc position for Long-wavelength MX at Diamond Light Source

2018-08-07 Thread armin.wag...@diamond.ac.uk
Are you interested in probing and pushing the boundaries of long-wavelength macromolecular crystallography? Then read on… We are seeking a highly motivated PDRA to join the I23 beamline team at Diamond Light Source (http://www.diamond.ac.uk/Instruments/Mx/I23.html) and carry out innovative

Re: [ccp4bb] X-server failed after installing coot

2018-08-07 Thread Paul Emsley
On 07/08/2018 08:29, syed ibrahim wrote: I am running Linux CentOS in my system. Recently I installed latest version of coot on my system. After successful installation, I restarted the system. But failed to recover Xserver screen. I was trying to restart Xserver from command mode but failed

[ccp4bb] X-server failed after installing coot

2018-08-07 Thread syed ibrahim
Dear All I am running Linux CentOS in my system. Recently I installed latest version of coot on my system. After successful installation, I restarted the system. But failed to recover Xserver screen. I was trying to restart Xserver from command mode but failed with following error message.

Re: [ccp4bb] cell discrepancies and stuck refinement using different XDS-versions

2018-08-07 Thread Kay Diederichs
Dear Sabine, indeed, the differences between the last XDS versions are in the area of indexing, with BUILT=20180409 being the most robust (and recommended) one. This gives the desired results in all my tests, and GlobalPhasing has successfully tested it with ~60 difficult cases. But there is