[ccp4bb] Permanent position on the cryo-electron microscopy facility at Université Paris-Saclay

2023-10-03 Thread THOMPSON Andrew
Dear all I would like to draw your attention to the following opportunity. Regards Andy A permanent position is open to join the cryo-electron microscopy facility at Université Paris-Saclay (cryoEM@UPSaclay) in the south of Paris, France. cryoEM@UPSaclay is a joint facility between the

Re: [ccp4bb] Regarding the correct space group identification

2022-07-29 Thread THOMPSON Andrew
Dear Sayan So much has been said about this already. What struck me, in looking at the second of your images, is that there is almost certain to be spot overlap (to the left / centre of the image) and a chance that the correct unit cell may be larger than the indexing suggests. The lower beam

Re: [ccp4bb] AlphaFold: more thinking and less pipetting (?)

2020-12-04 Thread THOMPSON Andrew
Just thinking out loud and following up Tom's post - Could prediction be a guide to sample preparation for detailed binding studies? Andy De : CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] de la part de Luca Pellegrini [lp...@cam.ac.uk] Envoyé : vendredi 4

Re: [ccp4bb] 8/ 2263 spots indexed XDS

2019-11-29 Thread THOMPSON Andrew
Hi Almudena I wouldn't claim to be a great expert on XDS, but, based on the experience of analyzing a load of data on the beamline, there are many things you can try - The most important ones are to use lots (all?) your images for the spot search (SPOT_RANGE) , and not to hesitate cutting the

Re: [ccp4bb] Se-SAD phasing

2019-07-18 Thread THOMPSON Andrew
Dear Mario The data seem very good but you are looking for an awful lot of sites. Keep trying with SHELX, but there are some keywords that you might use which may help (see extract from SHELX doc). This worked for me for a couple of structures with > 100 sites. You should also try with and

[ccp4bb] Beamline manager post available, SOLEIL PROXIMA 1.

2014-10-10 Thread THOMPSON Andrew
Hello everyone, Just to draw your attention to this opening for a beamline manager on the PROXIMA 1 beamline at the SOLEIL synchrotron. Gif sur Yvette, France. Anyone interested should look at the job description on the SOLEIL web pages

Re: [ccp4bb] tricky mr problem

2013-09-23 Thread THOMPSON Andrew
We often use a S-SAD type data collection (there would be no need for enormous redundancy) which, if your model is correct, should show up the S positions in the same way as a Se-met would show up the Se positions. Good way of validating your model and a help to tracing. Cheers Andy

[ccp4bb] Postdoctoral Positions for collaborative DIAMOND Light Source / Synchrotron - SOLEIL Initiative

2012-12-12 Thread THOMPSON Andrew
Dear All, We’d like to draw your attention to three PDRA posts (two at Diamond Light Source and one at Soleil) forming part of a collaborative initiative between Diamond Light Source in Didcot, UK and the Soleil synchrotron in Gif sur Yvette, France to develop methodology and automated

[ccp4bb] Reminder : Workshop on Advanced Data Collection with Multi-axis Goniometer and Single-photon Counting Detector

2012-09-11 Thread THOMPSON Andrew
Just a reminder that the closing date (30th September) for registering for this BioSTRUCT-X funded meeting is fast approaching. The meeting is aimed at synchrotron users wishing to get the most out of multi-circle goniometers / pixel array detectors. Workshop on Advanced Data Collection