Re: [ccp4bb] embarrassingly simple MAD phasing question

2010-10-13 Thread Yong Y Wang
It is already vertical, relative to the real part of Fa (in red), i.e. the blue vector is always vertical to the red vector in this picture (and counter-clockwise). Yong William Scott wgsc...@chemistry.ucsc.edu Sent by: CCP4 bulletin board CCP4BB@JISCMAIL.AC.UK 10/13/2010 01:48 PM Please

[ccp4bb] error in running Phaser NMA mode

2010-06-24 Thread Yong Y Wang
I am getting an error in running Phaser in NMA mode based on the usage in the Phaser document. pre BFONT COLOR=#FF html!-- CCP4 HTML LOGFILE -- !--SUMMARY_BEGIN-- #

Re: [ccp4bb] Coot- Find water

2010-02-09 Thread Yong Y Wang
Paul, It seems the distance criteria apply to protein atoms only, not including bound water. Is there a way to include atoms from water molecules in the distance constraint? Yong Paul Emsley paul.ems...@bioch.ox.ac.uk Sent by: CCP4 bulletin board CCP4BB@JISCMAIL.AC.UK 02/01/2010 09:02 AM

Re: [ccp4bb] Stereo TFT

2010-01-15 Thread Yong Y Wang
Alexander, What graphics card were you using in the demo system? From my experience, it seems only the high end card (FX3700 and up) can do this (having the 3-pin stereo connector). This is different from the situation for Windows where a low end card like FX380 works fine. The 3-pin stereo

Re: [ccp4bb] Stereo TFT

2010-01-15 Thread Yong Y Wang
, but I would asume that any quadro card with stereo output can be used with 3D Vision. Nvidia just seems to increase the price limit for cards with stereo output. Best regards, Alexander -Original Message- From: Yong Y Wang [mailto:wang_yon...@lilly.com] Sent: Friday, January 15, 2010

Re: [ccp4bb] Stereo TFT

2010-01-15 Thread Yong Y Wang
@JISCMAIL.AC.UK 01/15/2010 01:41 PM Please respond to schul...@cornell.edu To CCP4BB@JISCMAIL.AC.UK cc Subject Re: [ccp4bb] Stereo TFT On Fri, 2010-01-15 at 11:17 -0500, Yong Y Wang wrote: Alexander, I thought FX3700 would work. Good to hear confirmation from you. It would be nice a Linux

Re: [ccp4bb] [COOT] 120hz LCDs and coot stereo

2009-12-17 Thread Yong Y Wang
The glasses are not compatible. I tested swapping glasses while keeping the emitter unchanged and it did not work. Yong David J. Schuller dj...@cornell.edu Sent by: CCP4 bulletin board CCP4BB@JISCMAIL.AC.UK 12/17/2009 05:25 PM Please respond to schul...@cornell.edu To

Re: [ccp4bb] Caution - 120 Hz LCDs: Not CRT killers yet...

2009-01-31 Thread Yong Y Wang
Hi Warren, The Zalman 3D LCD was mentioned last year. Do you know if the Zalman 3D LCD can work with existing nVidia Quadro-based systems with existing emitters and glasses (or polarized glasses) running existing OpenGL software? Thanks, Yong

Re: [ccp4bb] References for ligand flipping

2008-02-19 Thread Yong Y Wang
Kendall, The story has been published. The lead paper is here: Norman, B. H.; Dodge, J. A.; Richardson, T. I.; Borromeo, P. S.; Lugar, C. W.; Jones, S. A.; Chen, K.; Wang, Y.; Durst, G. L.; Barr, R. J.; Montrose-Rafizadeh, C.; Osborne, H. E.; Amos, R. M.; Guo, S.; Boodhoo, A.; Krishnan, V.;