Re: [ccp4bb] Bin R and Rfree values

2015-02-08 Thread Bernhard Rupp
Onderwerp: RE: [ccp4bb] Bin R and Rfree values please report the bond length and angle rmsZ next to (or instead of) the rmsd in Table 1. ‘Instead’ alone is also not enough – if in a normalized statistic you do not know what you normalized against – that is, the variance or esd of the target

Re: [ccp4bb] Bin R and Rfree values

2015-02-06 Thread Robbie Joosten
: faisaltari...@gmail.com Subject: [ccp4bb] Bin R and Rfree values To: CCP4BB@JISCMAIL.AC.UK Hi everbody, I have one question with regards to the Bin R and Rfree values. My overall R and Rfree values for (resolution1.4 angstrom) is 15% and 19% respectively. But, the values in bin as shown in PDB header

Re: [ccp4bb] Bin R and Rfree values

2015-02-06 Thread Scott Thomas Walsh
, Robbie Date: Fri, 6 Feb 2015 15:29:00 + From: faisaltari...@gmail.commailto:faisaltari...@gmail.com Subject: [ccp4bb] Bin R and Rfree values To: CCP4BB@JISCMAIL.AC.UKmailto:CCP4BB@JISCMAIL.AC.UK Hi everbody, I have one question with regards to the Bin R

Re: [ccp4bb] Bin R and Rfree values

2015-02-06 Thread Bernhard Rupp
please report the bond length and angle rmsZ next to (or instead of) the rmsd in Table 1. 'Instead' alone is also not enough - if in a normalized statistic you do not know what you normalized against - that is, the variance or esd of the target distribution - you do not know what Z means.

Re: [ccp4bb] Bin R and Rfree values

2015-02-06 Thread Robbie Joosten
Sent with my Windows Phone Van: b...@ruppweb.orgmailto:b...@ruppweb.org Verzonden: ‎6-‎2-‎2015 17:19 Aan: 'Robbie Joosten'mailto:robbie_joos...@hotmail.com; CCP4BB@JISCMAIL.AC.UKmailto:CCP4BB@JISCMAIL.AC.UK Onderwerp: RE: [ccp4bb] Bin R and Rfree values please

[ccp4bb] Bin R and Rfree values

2015-02-06 Thread Faisal Tarique
Hi everbody, I have one question with regards to the Bin R and Rfree values. My overall R and Rfree values for (resolution1.4 angstrom) is 15% and 19% respectively. But, the values in bin as shown in PDB header after the refinement from the REFMAC are 15.7% for R and 14.5% for Rfree. In this R