Re: [ccp4bb] Enforcing ncs on water molecules

2010-11-16 Thread Eleanor Dodson
Well - I usually use the COOT ncs map generation first. You place waters into good peaks in the 3 fold averaged map -say it is A B C - check that there are reasonable peaks in the other rotated maps - then once the waters are generated for A, fit those coordinates A to B and save them, then A t

Re: [ccp4bb] Enforcing ncs on water molecules

2010-11-15 Thread David Veesler
Dear Dale, concerning the first part of your request you can use BUSTER and include your water molecules in ncs restraints. Here is the link for the wiki explaining that http://www.globalphasing.com/buster/wiki/index.cgi?AutoBusterExample4chawaterNCS HTH All the best David Le 15 nov. 10 à 21:4

[ccp4bb] Enforcing ncs on water molecules

2010-11-15 Thread Dale Tronrud
Hi I'm refining my first structure with a significant amount of ncs and am not looking forward to my usual, manual, editing of the water model. Could someone point me in the direction of a program that will encourage my water to obey the ncs? What I have in mind is to, first, find each clus