We have structures of two states of a large multi-domain protein in
which domain
movements of up to 30 degrees are observed. Is there a programme
available which
attempts to determine rigid-body units and hinge regions in an
'unbiased' way?
thanks for your suggestions,
Stephen Cusack
--
Dear Stephen,
I find DynDom very good (http://fizz.cmp.uea.ac.uk/dyndom/)
otherwise the morph server
(http://molmovdb.mbb.yale.edu/molmovdb/morph/) also performs similar
analysis, cheers, Matt.
On 26/08/2011 11:25, Stephen Cusack wrote:
We have structures of two states of a large
DynDom version 1.5 is part of the CCP4 suite.
There is an interface for it under Program List.
Although Steve Hayward appears to have a new version DynDom3D which we
don't have. No idea if it would be better for your case.
HTH
Martyn
On Fri, 2011-08-26 at 11:28 +0200, Matthew BOWLER wrote:
