Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Ian Tickle
: CCP4BB@jiscmail.ac.uk Subject: Re: [ccp4bb] structure (factor) amplitude On 1/10/2009 5:14 PM, Ethan A Merritt wrote: On Saturday 10 January 2009, Bernhard Rupp wrote: Dear All, I am getting conflicting comments on the use

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Dirk Kostrewa
by a considerable margin. Cheers -- Ian -Original Message- From: owner-ccp...@jiscmail.ac.uk [mailto:owner-ccp...@jiscmail.ac.uk] On Behalf Of Pavel Afonine Sent: 11 January 2009 03:01 To: Ethan A Merritt Cc: CCP4BB@jiscmail.ac.uk Subject: Re: [ccp4bb] structure (factor) amplitude On 1/10/2009 5:14

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Ian Tickle
: [ccp4bb] structure (factor) amplitude ... despite these informations, I still prefer structure factor amplitude, because it is the amplitude of the structure factor ... Best regards, Dirk. Am 12.01.2009 um 11:42 schrieb Ian Tickle: I was taught 'structure amplitude' - makes perfect

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Dirk Kostrewa
-Original Message- From: owner-ccp...@jiscmail.ac.uk [mailto:owner-ccp...@jiscmail.ac.uk] On Behalf Of Dirk Kostrewa Sent: 12 January 2009 10:52 To: CCP4BB Subject: Re: [ccp4bb] structure (factor) amplitude ... despite these informations, I still prefer structure factor amplitude, because

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Gerard Bricogne
] On Behalf Of Dirk Kostrewa Sent: 12 January 2009 10:52 To: CCP4BB Subject: Re: [ccp4bb] structure (factor) amplitude ... despite these informations, I still prefer structure factor amplitude, because it is the amplitude of the structure factor ... Best regards, Dirk. Am

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Marc SCHILTZ
Ian Tickle wrote: I think there's a confusion here between the name of an object (what you call it) and its description (i.e. its properties). The name of the object is structure amplitude and it's description is amplitude of the structure factor, or if you prefer the shortened form structure

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Ian Tickle
: Re: [ccp4bb] structure (factor) amplitude Dear Ian, My reply to this question will be less literate and less democratic than yours. In spite of the nice Alice quote, I remain in favour of trying to use compound names whose internal structure is, as much as possible, isomorphic

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Anastassis Perrakis
-Original Message- From: Gerard Bricogne [mailto:g...@globalphasing.com] Sent: 12 January 2009 12:09 To: Ian Tickle Cc: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] structure (factor) amplitude Dear Ian, My reply to this question will be less literate and less democratic than yours. In spite

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Ed Pozharski
Also I did a 'Google vote' for the two terms. 'Structure amplitude' has 11300 hits. 'Structure factor amplitude' has only 4750. So all round I would say that 'structure amplitude' wins by a considerable margin. Results of another Google vote: Earth is flat:

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Alessandro Vannini
: [ccp4bb] structure (factor) amplitude Dear Ian, My reply to this question will be less literate and less democratic than yours. In spite of the nice Alice quote, I remain in favour of trying to use compound names whose internal structure is, as much as possible, isomorphic to the composition

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Andrew Purkiss-Trew
...@jiscmail.ac.uk [mailto:owner-ccp...@jiscmail.ac.uk] On Behalf Of Pavel Afonine Sent: 11 January 2009 03:01 To: Ethan A Merritt Cc: CCP4BB@jiscmail.ac.uk Subject: Re: [ccp4bb] structure (factor) amplitude On 1/10/2009 5:14 PM, Ethan A Merritt wrote: On Saturday 10 January 2009

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Sue Roberts
January 2009 03:01 To: Ethan A Merritt Cc: CCP4BB@jiscmail.ac.uk Subject: Re: [ccp4bb] structure (factor) amplitude On 1/10/2009 5:14 PM, Ethan A Merritt wrote: On Saturday 10 January 2009, Bernhard Rupp wrote: Dear All, I am

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Jim Pflugrath
I wonder if the early use of the shortened structure amplitude is because it was a pain to do any typing, word processing, typesetting, etc before Gutenberg. But soon crystallographers will be solving all their structures on their cell phones and also just text messaging manuscripts to

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Karsten . Niefind
My preference is also for the full structure factor amplitude. I would have said that I'd never seen the term structure amplitude used. However, I just looked this up in my old Stout Jensen (1968 edition - brown cover) and find that (on p. 195) where |F| is introduced they define it

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Ian Tickle
] structure (factor) amplitude Also I did a 'Google vote' for the two terms. 'Structure amplitude' has 11300 hits. 'Structure factor amplitude' has only 4750. So all round I would say that 'structure amplitude' wins by a considerable margin. Results of another Google vote: Earth

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread mesters
-Original Message- From: owner-ccp...@jiscmail.ac.uk mailto:owner-ccp...@jiscmail.ac.uk [mailto:owner-ccp...@jiscmail.ac.uk] On Behalf Of Pavel Afonine Sent: 11 January 2009 03:01 To: Ethan A Merritt Cc: CCP4BB@jiscmail.ac.uk mailto:CCP4BB@jiscmail.ac.uk Subject: Re: [ccp4bb] structure (factor

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Ethan Merritt
[mailto:owner-ccp...@jiscmail.ac.uk] On Behalf Of Pavel Afonine Sent: 11 January 2009 03:01 To: Ethan A Merritt Cc: CCP4BB@jiscmail.ac.uk Subject: Re: [ccp4bb] structure (factor) amplitude On 1/10/2009 5:14 PM, Ethan A Merritt wrote: On Saturday 10 January 2009, Bernhard

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Jacob Keller
: 773.608.9185 email: j-kell...@northwestern.edu *** - Original Message - From: Ethan Merritt merr...@u.washington.edu To: CCP4BB@JISCMAIL.AC.UK Sent: Monday, January 12, 2009 10:59 AM Subject: Re: [ccp4bb] structure (factor) amplitude On Monday 12

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Bernhard Rupp
Hmmm. Sacha just threw another wrench into that discourse. Seems we are also faced with a duality problem here: Coming from a mathematical point of view treating F as a complex number, structure factor magnitude or structure factor modulus is more logical and more direct. If you are

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Jianghai Zhu
12, 2009 10:59 AM Subject: Re: [ccp4bb] structure (factor) amplitude On Monday 12 January 2009 02:42:43 Ian Tickle wrote: Also I did a 'Google vote' for the two terms. 'Structure amplitude' has 11300 hits. 'Structure factor amplitude' has only 4750. So all round I would say

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Ian Tickle
Subject: Re: [ccp4bb] structure (factor) amplitude Hmmm. Sacha just threw another wrench into that discourse. Seems we are also faced with a duality problem here: Coming from a mathematical point of view treating F as a complex number, structure factor magnitude or structure

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Gerard Bricogne
merr...@u.washington.edu To: CCP4BB@JISCMAIL.AC.UK Sent: Monday, January 12, 2009 10:59 AM Subject: Re: [ccp4bb] structure (factor) amplitude On Monday 12 January 2009 02:42:43 Ian Tickle wrote: Also I did a 'Google vote' for the two terms. 'Structure amplitude' has 11300 hits. 'Structure

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Jianghai Zhu
Sent: Monday, January 12, 2009 10:59 AM Subject: Re: [ccp4bb] structure (factor) amplitude On Monday 12 January 2009 02:42:43 Ian Tickle wrote: Also I did a 'Google vote' for the two terms. 'Structure amplitude' has 11300 hits. 'Structure factor amplitude' has only 4750. So all round I

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Ethan Merritt
@JISCMAIL.AC.UK Sent: Monday, January 12, 2009 10:59 AM Subject: Re: [ccp4bb] structure (factor) amplitude On Monday 12 January 2009 02:42:43 Ian Tickle wrote: Also I did a 'Google vote' for the two terms. 'Structure amplitude' has 11300 hits. 'Structure factor amplitude' has only 4750. So

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Robert Sweet
Come on, Jim, even now 90% of students don't realize that boldF/bold is a phased amplitude, we think of it as a complex number, and that F(obs) or F(calc) are probably the appropriate |F|. Bob On Mon, 12 Jan 2009, Jim Pflugrath wrote: I wonder if the early use of the shortened structure

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Gerard DVD Kleywegt
As suggested by Tassos, what we need now more than ever is some Dutch diplomacy so that he healing can really begin. Various people have argued for a shorter term (Brazilians, Pflugrath) and since I'm personally rather partial to Brazilians I would say we ought to go with that and shave off a

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Gerard Bricogne
Dear Gerard, As usual, your contribution is a hard act to follow. However, given that your actual proposal can be rather indigestible (especially with lots of cream) we might have to stick with the current options. What the perusal of James has revealed is that, if we want to respect

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Pete Meyer
PS: I vote for that structure factor amplitude be used in text books and |F| on cell phones. Student of 2015: You mean 'abs-F' is really pronounced 'structure factor amplitude'? I didn't know that! By 2015, it would probably be some less-comprehensible variant of instant-messenging

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Fischmann, Thierry
coordinates Thierry -Original Message- From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of Gerard Bricogne Sent: Monday, January 12, 2009 02:34 PM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] structure (factor) amplitude Dear Gerard, As usual, your contribution

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Jacob Keller
*** - Original Message - From: Fischmann, Thierry thierry.fischm...@spcorp.com To: CCP4BB@JISCMAIL.AC.UK Sent: Monday, January 12, 2009 1:45 PM Subject: Re: [ccp4bb] structure (factor) amplitude I'll add my 2 calories then. Gerard's new naming carefully avoids the Factor

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread James Stroud
On Jan 12, 2009, at 11:09 AM, Ethan Merritt wrote: geometrical structure factor gets 68 hits in the IUCr search engine, and 2190 GHits (GHits == Google Hits) To avoid confusion, can we use gHit as a google Hit unit? First, google is traditionally spelled with a lowercase g[1]. Second, one

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread marc . schiltz
Ian Tickle wrote: OK, limiting the vote to people whom I think we can assume know what vaguely they're talking about, i.e. Acta Cryst. / J. Appl. Cryst. authors, and using the IUCr search engine we get 553 hits for structure amplitude and 256 for structure factor amplitude But be warned that

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Jacob Keller
- Original Message - From: Bernhard Rupp bernhardr...@sbcglobal.net To: CCP4BB@JISCMAIL.AC.UK Sent: Saturday, January 10, 2009 4:09 PM Subject: [ccp4bb] structure (factor) amplitude Dear All, I am getting conflicting comments on the use of 'structure factor amplitude' vs. just

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread Ian Tickle
-Original Message- From: marc.schi...@epfl.ch [mailto:marc.schi...@epfl.ch] Sent: 12 January 2009 22:35 To: Ian Tickle Cc: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] structure (factor) amplitude Ian Tickle wrote: OK, limiting the vote to people whom I think we can assume

Re: [ccp4bb] structure (factor) amplitude

2009-01-12 Thread mjvdwoerd
  Subject: Re: [ccp4bb] structure (factor) amplitude    Dear Ian,    My reply to this question will be less literate and less  democratic  than yours. In spite of the nice Alice quote, I remain in  favour of trying  to use compound names whose internal structure is, as much as  possible

[ccp4bb] structure (factor) amplitude

2009-01-10 Thread Bernhard Rupp
Dear All, I am getting conflicting comments on the use of 'structure factor amplitude' vs. just 'structure amplitude' for |F|. Is there some 'modern' consensus on a preference? Best, BR

Re: [ccp4bb] structure (factor) amplitude

2009-01-10 Thread Ethan A Merritt
On Saturday 10 January 2009, Bernhard Rupp wrote: Dear All, I am getting conflicting comments on the use of 'structure factor amplitude' vs. just 'structure amplitude' for |F|. ??? That's just... odd. |F| is the amplitude of F. But no way F is a structure. -- Ethan A Merritt

Re: [ccp4bb] structure (factor) amplitude

2009-01-10 Thread Pavel Afonine
On 1/10/2009 5:14 PM, Ethan A Merritt wrote: On Saturday 10 January 2009, Bernhard Rupp wrote: Dear All, I am getting conflicting comments on the use of 'structure factor amplitude' vs. just 'structure amplitude' for |F|. ??? That's just... odd. |F| is the amplitude of F. But no