Re: [ccp4bb] Measuring angles between domains

2021-11-14 Thread Jon Cooper
Or, you can start Coot in the terminal. Little CueMol gives the same info. Sent from ProtonMail mobile Original Message On 14 Nov 2021, 07:24, Eleanor Dodson wrote: > Well I do this by overlapping one domain of protein A onto protein B - you > can do that in coot - then

Re: [ccp4bb] Measuring angles between domains

2021-11-13 Thread Eleanor Dodson
Well I do this by overlapping one domain of protein A onto protein B - you can do that in coot - then overlap the second domain of the shifted A onto the second domain of B. The coot log file tells you omega phi kappa applied and kappa is your angle of interest... is that clear enough - I could

Re: [ccp4bb] Measuring angles between domains

2021-11-12 Thread Ishan Rathore
Hi Kyle I have used this pymol plugin to measure the angle between domains https://pymolwiki.org/index.php/Angle_between_domains Regards Ishan On Sat, Nov 13, 2021, 12:35 AM Kyle Gregory < 3632e92fcc15-dmarc-requ...@jiscmail.ac.uk> wrote: > Dear CCP4 bulletin board, > > I have two