Re: [ccp4bb] how many metal sites

2013-01-16 Thread Dale Tronrud
Zn is a very electron rich atom so a 2.3 A resolution data set should be a fine experiment to determine the number of fully occupied metal sites. It is always hard to be sure about screen shots of density, but it looks to me that you only have evidence for one zinc here. In my opinion, it

Re: [ccp4bb] how many metal sites

2013-01-16 Thread Roger Rowlett
The geometry is difficult to see from a static image, but it looks like you possibly have a His(2)Glu(4) coordination environment around what looks like one likely metal ion, based on the difference density. Zn(II) is typcially (but not always) tetrahedral with Zn-O/N bond distances of

Re: [ccp4bb] how many metal sites

2013-01-16 Thread Nat Echols
On Wed, Jan 16, 2013 at 2:53 PM, Roger Rowlett rrowl...@colgate.edu wrote: When you are a building a metalloenzyme model you should really have some solid evidence that a metal ion is present by (1) inclusion in the crystallization medium, (2) direct determination by an analytical technique,

Re: [ccp4bb] how many metal sites

2013-01-16 Thread Dr. Anthony Addlagatta
-- Original Message --- From: Dale Tronrud det...@uoxray.uoregon.edu To: CCP4BB@JISCMAIL.AC.UK Sent: Wed, 16 Jan 2013 14:14:50 -0800 Subject: Re: [ccp4bb] how many metal sites *** This message has been scanned by the InterScan for CSC SSM at IICT and found