Re: [ccp4bb] mosflm and APS BM17

2007-08-22 Thread Harry Powell
Hi I'd guess from the input file that the beam centre may be defined in a different reference frame to that which Mosflm expects in the image header; other possibilities are that the distance, wavelength, or something else (!) is wrong. Indexing is critically dependent on having the beam

[ccp4bb] crystal with precipitation

2007-08-22 Thread shivesh kumar
Dear all I am trying to crystallize a 7kDa protein using MPD as a precipitant at 16C.I have got small florets at 55-65% of MPD in 3-4 days.The problem is that the drop is precipitating in one day only and the crystals are coming with precipitation.I have added 5% glycerol and 100mM of Nacl as an

Re: [ccp4bb] crystal with precipitation

2007-08-22 Thread Lisa A Nagy
Oh, there is do much you can do! Lots of alternatives: 1. Decrease or increase the protein concentration (with a corresponding increase or decrease of precipitant. 2. Use a temperature gradient. 3. Set up in a capillary with liquid-liquid diffusion 4. SEED! #3 or #4 are your best bets, probably.

Re: [ccp4bb] mosflm and APS BM17

2007-08-22 Thread Jan Abendroth
Hi all, thanks a lot for all the responses! As anticipated, the solution is rather simple - the origin of the beam: denzo refines to: x=82.6 y=80.3 mosflm reads from header: x=80.0 y=84.0 - bad indexing etc mosflm works with: x=82.6 y=80.3 No swapping of x and y between denzo and mosflm in this

[ccp4bb] [Fwd: Re: [ccp4bb]: self rotation function matrix NCS matrix]

2007-08-22 Thread weikai
Hi Eleanor and others: This is a little too late to follow up on this thread. But here is a similar question concerning MR and self-rotation. Without going into the translational part of MR, is it possible to tell the orientation of a 2-fold axis directly from the cross-rotation peaks? e.g. I