Dear Bulletin Board,
A referee wants for the “Table 1” in the supplementary information the
following data:
The r.m.s.d. ΔB (bonded atoms) (Å2)
All protein atoms
Main chain – Main chain
Side chain – Side chain
Main chain – Side chain
r.m.s.d. ΔB (Non-bonded contacts) (Å2)
All protein atoms
PhD Positions are open in Dynamic crystallography and WAXS in the context of
an European Initial Training Network.
The PhD will have the opportunity to be in a training and exchange program
between leading European Groups in Dynamic crystallography using Advanced
Synchrotrons and Free
Ls,
I dont think these numbers are useful by themselves. It makes more sense
to look at differences in these numbers (between bound atoms in your
protein and in 'the rest of the PDB') as function of as many external
conditions as statistics allow. Then determine averages with SD, and
score
Dear Herman,
I am not sure what you really want. Maybe this can help you.
You can get the following numbers out of MAIN
1. comparing a pair of selections. It makes sense only if they are equivalent.
rms b-val select my_selection_1 end select my_selection_2 end
2. Show command does
Hi all,
We are looking to recruit an expert structural biologist (with experience in
structure determination) to join the Protein Data Bank in Europe curation team
(PDBe: pdbe.org) at the European Bioinformatics Institute (EMBL-EBI,
Cambridge, UK) as a Scientific Database Curator. The work
